| Chain sequence(s) |
A: VQIIVYK
B: VQIVYK input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6757 | |
| 2 | Q | A | 0.7177 | |
| 3 | I | A | 2.5937 | |
| 4 | V | A | 2.3528 | |
| 5 | Y | A | 1.6541 | |
| 6 | K | A | -0.6204 | |
| 1 | V | B | 1.6511 | |
| 2 | Q | B | 0.5995 | |
| 3 | I | B | 2.1742 | |
| 4 | V | B | 2.2206 | |
| 5 | Y | B | 1.5981 | |
| 6 | K | B | -0.4893 |