Project name: (EAAAK)17

Status: done

Started: 2026-01-16 14:18:51
Settings
Chain sequence(s) A: EAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAKEAAAK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:53)
Show buried residues

Minimal score value
-3.6729
Maximal score value
-1.5408
Average score
-2.803
Total score value
-238.2583

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -2.4495
2 A A -1.8164
3 A A -1.5913
4 A A -1.8641
5 K A -3.3470
6 E A -3.4645
7 A A -2.3084
8 A A -2.1606
9 A A -2.5031
10 K A -3.6006
11 E A -3.6532
12 A A -2.5205
13 A A -2.1813
14 A A -2.5088
15 K A -3.6030
16 E A -3.6601
17 A A -2.5198
18 A A -2.1625
19 A A -2.5095
20 K A -3.6007
21 E A -3.6590
22 A A -2.5125
23 A A -2.1776
24 A A -2.5199
25 K A -3.6138
26 E A -3.6729
27 A A -2.5397
28 A A -2.1933
29 A A -2.5059
30 K A -3.6090
31 E A -3.6665
32 A A -2.5177
33 A A -2.1531
34 A A -2.5161
35 K A -3.6022
36 E A -3.6609
37 A A -2.5122
38 A A -2.1779
39 A A -2.5158
40 K A -3.6045
41 E A -3.6595
42 A A -2.5209
43 A A -2.1695
44 A A -2.4958
45 K A -3.5937
46 E A -3.6571
47 A A -2.5029
48 A A -2.1666
49 A A -2.5017
50 K A -3.6073
51 E A -3.6631
52 A A -2.5206
53 A A -2.1905
54 A A -2.5053
55 K A -3.6092
56 E A -3.6657
57 A A -2.5250
58 A A -2.1659
59 A A -2.5014
60 K A -3.6025
61 E A -3.6622
62 A A -2.5121
63 A A -2.1838
64 A A -2.5116
65 K A -3.6095
66 E A -3.6611
67 A A -2.5294
68 A A -2.1905
69 A A -2.4974
70 K A -3.6030
71 E A -3.6599
72 A A -2.5234
73 A A -2.1784
74 A A -2.4948
75 K A -3.6037
76 E A -3.6544
77 A A -2.5283
78 A A -2.1908
79 A A -2.3201
80 K A -3.3967
81 E A -3.3675
82 A A -2.0111
83 A A -1.5408
84 A A -1.7464
85 K A -2.3018
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Laboratory of Theory of Biopolymers 2018