Project name: Ag_metK

Status: done

Started: 2026-05-31 07:04:52
Settings
Chain sequence(s) A: MNEYLFTSESVSEGHPDKIADQISDALLDAIIKQDIKARVACETYVKTGMVLIGGEITTTAWVDVEEITRNTINNIGYINSETGFDANSCAILSAIGKQSPDINQGVDRSDPLKQGAGDQGIIFGYATNETEVLMPAPITYAHLLVKKQSELRKKNILSWLRPDAKSQVTFKYKNGNVIGIDTVVFSTQHKESISQNILKEAVMEEIIKPVLPKKWLTKDTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGIAEPTSIMIETFRTGKLSNKVLINLVRDIFDLRPYGLIEMLNLLQPIYLKTSVYGHFGREEFPWEKLDKVDALSQ
B: MNEYLFTSESVSEGHPDKIADQISDALLDAIIKQDIKARVACETYVKTGMVLIGGEITTTAWVDVEEITRNTINNIGYINSETGFDANSCAILSAIGKQSPDINQGVDRSDPLKQGAGDQGIIFGYATNETEVLMPAPITYAHLLVKKQSELRKKNILSWLRPDAKSQVTFKYKNGNVIGIDTVVFSTQHKESISQNILKEAVMEEIIKPVLPKKWLTKDTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGIAEPTSIMIETFRTGKLSNKVLINLVRDIFDLRPYGLIEMLNLLQPIYLKTSVYGHFGREEFPWEKLDKVDALSQ
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:10:58)
[INFO]       Main:     Simulation completed successfully.                                          (00:11:05)
Show buried residues

Minimal score value
-3.2758
Maximal score value
0.9176
Average score
-0.6152
Total score value
-466.2962

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.2564
2 N A -2.1218
3 E A -2.0824
4 Y A -1.0802
5 L A -0.1236
6 F A 0.0000
7 T A 0.0000
8 S A 0.0000
9 E A -0.2738
10 S A 0.0000
11 V A 0.0000
12 S A 0.0000
13 E A 0.0000
14 G A 0.0000
15 H A 0.0000
16 P A 0.0000
17 D A 0.0000
18 K A 0.0000
19 I A 0.0000
20 A A 0.0000
21 D A 0.0000
22 Q A 0.0000
23 I A 0.0000
24 S A 0.0000
25 D A 0.0000
26 A A 0.0000
27 L A 0.0000
28 L A 0.0000
29 D A -0.6853
30 A A -0.6560
31 I A 0.0000
32 I A 0.0000
33 K A -2.0029
34 Q A -1.6530
35 D A 0.0000
36 I A 0.1006
37 K A -1.0745
38 A A 0.0000
39 R A -0.7458
40 V A 0.0000
41 A A -0.3386
42 C A 0.0000
43 E A 0.0000
44 T A 0.0000
45 Y A 0.0000
46 V A 0.0000
47 K A 0.0000
48 T A -0.1441
49 G A -0.2791
50 M A 0.1941
51 V A 0.0000
52 L A 0.0000
53 I A 0.0000
54 G A 0.0000
55 G A 0.0000
56 E A 0.0000
57 I A -0.4243
58 T A -0.8108
59 T A -0.4211
60 T A -0.0192
61 A A -0.1120
62 W A 0.9176
63 V A -0.1336
64 D A -1.4672
65 V A -1.0960
66 E A -2.4419
67 E A -3.0204
68 I A -1.5894
69 T A 0.0000
70 R A -2.0131
71 N A -2.0944
72 T A 0.0000
73 I A 0.0000
74 N A -1.0620
75 N A -1.6267
76 I A 0.0000
77 G A -0.4395
78 Y A 0.0000
79 I A 0.4498
80 N A -0.6414
81 S A -1.2355
82 E A -2.1355
83 T A -0.8214
84 G A -0.5118
85 F A 0.0000
86 D A -0.7770
87 A A 0.0000
88 N A -1.6149
89 S A -0.8063
90 C A 0.0000
91 A A -0.0988
92 I A 0.1039
93 L A 0.7706
94 S A 0.2727
95 A A 0.3542
96 I A 0.3093
97 G A -0.7048
98 K A -1.7631
99 Q A -1.1287
100 S A 0.0000
101 P A -0.7951
102 D A 0.0000
103 I A -0.6904
104 N A -1.7296
105 Q A -2.2134
106 G A 0.0000
107 V A 0.0000
108 D A -3.2758
109 R A -3.1326
110 S A -1.8149
111 D A -1.8445
112 P A -1.4436
113 L A -1.0790
114 K A -2.6048
115 Q A -2.0911
116 G A 0.0000
117 A A 0.0000
118 G A -0.7480
119 D A -0.5776
120 Q A 0.0000
121 G A 0.0000
122 I A 0.0000
123 I A 0.0000
124 F A 0.0000
125 G A 0.0000
126 Y A 0.0000
127 A A 0.0000
128 T A 0.0000
129 N A -2.1703
130 E A -1.8058
131 T A -1.3045
132 E A -1.9553
133 V A -1.0973
134 L A -1.0153
135 M A 0.0000
136 P A 0.0000
137 A A 0.0000
138 P A 0.0000
139 I A 0.0000
140 T A 0.2142
141 Y A 0.1893
142 A A 0.0000
143 H A 0.0000
144 L A 0.0981
145 L A 0.0000
146 V A 0.0000
147 K A -1.3104
148 K A -1.3845
149 Q A 0.0000
150 S A 0.0000
151 E A -2.4204
152 L A 0.0000
153 R A 0.0000
154 K A -2.8679
155 K A -2.7303
156 N A -1.8740
157 I A 0.1505
158 L A -0.1720
159 S A -0.6279
160 W A -0.4471
161 L A 0.0000
162 R A 0.0000
163 P A 0.0000
164 D A 0.0000
165 A A 0.0000
166 K A -0.3330
167 S A 0.0000
168 Q A 0.0000
169 V A 0.0000
170 T A 0.0000
171 F A 0.0000
172 K A -0.7433
173 Y A 0.0000
174 K A -2.0377
175 N A -2.2464
176 G A -1.8974
177 N A -1.9310
178 V A 0.0000
179 I A 0.0212
180 G A 0.0000
181 I A 0.0000
182 D A -1.2008
183 T A 0.0000
184 V A 0.0000
185 V A 0.0000
186 F A 0.0000
187 S A -0.2144
188 T A 0.0000
189 Q A 0.0000
190 H A 0.0000
191 K A -2.0984
192 E A -2.5884
193 S A -1.3757
194 I A -0.7911
195 S A -1.0766
196 Q A -1.9518
197 N A -1.7041
198 I A 0.0822
199 L A 0.0000
200 K A -2.1795
201 E A -2.6876
202 A A -1.7420
203 V A 0.0000
204 M A -1.7849
205 E A -3.0011
206 E A -1.9005
207 I A 0.0000
208 I A 0.0000
209 K A -1.7772
210 P A -1.3079
211 V A 0.0000
212 L A 0.0000
213 P A -1.4448
214 K A -2.5836
215 K A -2.2319
216 W A -0.9842
217 L A -1.7175
218 T A -2.2185
219 K A -2.8533
220 D A -3.0495
221 T A 0.0000
222 K A -2.1700
223 F A -0.4946
224 F A 0.0686
225 I A -0.5573
226 N A 0.0000
227 P A -0.2554
228 T A -0.5702
229 G A -1.2913
230 R A -1.7624
231 F A -0.7411
232 V A 0.0000
233 I A -0.4048
234 G A 0.0000
235 G A 0.0000
236 P A 0.0000
237 M A -0.1413
238 G A 0.0000
239 D A -1.1345
240 C A 0.0000
241 G A 0.0000
242 L A 0.0000
243 T A 0.0000
244 G A 0.0000
245 R A 0.0000
246 K A -0.2694
247 I A 0.0000
248 I A 0.0000
249 V A 0.0000
250 D A 0.0000
251 T A 0.0000
252 Y A 0.0000
253 G A 0.0000
254 G A 0.0000
255 M A -0.0029
256 S A 0.0000
257 R A -0.3103
258 H A 0.0000
259 G A 0.0000
260 G A -0.2825
261 G A -0.3150
262 A A 0.0000
263 F A 0.0000
264 S A 0.0000
265 G A 0.0000
266 K A 0.0000
267 D A 0.0000
268 P A 0.0000
269 S A -0.4267
270 K A -0.5899
271 V A 0.0000
272 D A -0.5516
273 R A 0.0000
274 S A 0.0000
275 A A 0.0000
276 A A 0.0000
277 Y A 0.0000
278 A A 0.0000
279 A A 0.0000
280 R A 0.0000
281 Y A 0.0000
282 V A 0.0000
283 A A 0.0000
284 K A 0.0000
285 N A 0.0000
286 I A 0.0000
287 V A 0.0000
288 A A -0.7519
289 A A -0.5474
290 G A -0.9376
291 L A 0.0000
292 A A 0.0000
293 D A -2.2246
294 R A -1.3883
295 C A 0.0000
296 E A 0.0000
297 I A 0.0000
298 Q A 0.0000
299 L A 0.0000
300 S A 0.0000
301 Y A 0.0000
302 A A 0.0000
303 I A 0.0000
304 G A 0.0000
305 I A -0.6752
306 A A 0.0000
307 E A -2.2745
308 P A -1.0168
309 T A -0.6121
310 S A 0.0000
311 I A -0.1455
312 M A 0.0000
313 I A 0.0000
314 E A -1.0678
315 T A 0.0000
316 F A -0.3863
317 R A -1.9900
318 T A -1.6112
319 G A -1.7577
320 K A -2.0920
321 L A -0.6826
322 S A -0.9810
323 N A -1.6590
324 K A -1.7971
325 V A 0.1087
326 L A 0.0000
327 I A -1.1828
328 N A -1.8105
329 L A -1.3124
330 V A 0.0000
331 R A -2.7902
332 D A -2.7780
333 I A -1.3579
334 F A 0.0000
335 D A -1.7611
336 L A 0.0000
337 R A -1.4473
338 P A 0.0000
339 Y A -0.5860
340 G A 0.0000
341 L A 0.0000
342 I A -0.9514
343 E A -1.9630
344 M A -1.0339
345 L A 0.0000
346 N A -1.7907
347 L A 0.0000
348 L A -0.3635
349 Q A -0.6538
350 P A -0.7192
351 I A -0.5516
352 Y A 0.0000
353 L A -0.1587
354 K A -1.3836
355 T A 0.0000
356 S A 0.0000
357 V A -0.2011
358 Y A -0.1950
359 G A 0.0000
360 H A 0.0000
361 F A 0.0000
362 G A -0.9447
363 R A -1.8518
364 E A -3.0687
365 E A -3.1821
366 F A 0.0000
367 P A -1.5274
368 W A 0.0000
369 E A 0.0000
370 K A -2.4262
371 L A -1.2164
372 D A -2.2523
373 K A -1.5241
374 V A -1.3535
375 D A -2.3148
376 A A -1.6396
377 L A 0.0000
378 S A -1.3589
379 Q A -1.6444
1 M B -0.4878
2 N B -2.6156
3 E B -2.9789
4 Y B -1.4904
5 L B -0.2327
6 F B 0.0000
7 T B 0.0000
8 S B 0.0000
9 E B -0.2751
10 S B 0.0000
11 V B 0.0000
12 S B 0.0000
13 E B 0.0000
14 G B 0.0000
15 H B 0.0000
16 P B 0.0000
17 D B 0.0000
18 K B 0.0000
19 I B 0.0000
20 A B 0.0000
21 D B 0.0000
22 Q B 0.0000
23 I B 0.0000
24 S B 0.0000
25 D B 0.0000
26 A B 0.0000
27 L B 0.0000
28 L B 0.0000
29 D B 0.0000
30 A B -0.5844
31 I B 0.0000
32 I B 0.0000
33 K B -2.0187
34 Q B -1.7361
35 D B -0.9637
36 I B -0.0437
37 K B -1.1619
38 A B 0.0000
39 R B -0.7645
40 V B 0.0000
41 A B -0.4111
42 C B 0.0000
43 E B 0.0000
44 T B 0.0000
45 Y B 0.0000
46 V B 0.0000
47 K B 0.0000
48 T B -0.1334
49 G B -0.2749
50 M B 0.1817
51 V B 0.0000
52 L B 0.0000
53 I B 0.0000
54 G B 0.0000
55 G B 0.0000
56 E B 0.0000
57 I B -0.4441
58 T B -0.8263
59 T B -0.4720
60 T B -0.0786
61 A B -0.0781
62 W B 0.9046
63 V B -0.1200
64 D B -1.4432
65 V B -1.1041
66 E B -2.4881
67 E B -3.0673
68 I B -1.6167
69 T B 0.0000
70 R B -2.1368
71 N B -2.2192
72 T B 0.0000
73 I B 0.0000
74 N B -1.3032
75 N B -1.7394
76 I B 0.0000
77 G B -0.6492
78 Y B 0.0000
79 I B -0.2272
80 N B -0.9945
81 S B -1.3829
82 E B -2.2341
83 T B 0.0000
84 G B -0.6027
85 F B 0.0000
86 D B -1.0315
87 A B 0.0000
88 N B -1.7763
89 S B -0.8926
90 C B 0.0000
91 A B -0.1234
92 I B 0.0539
93 L B 0.6848
94 S B 0.2306
95 A B 0.3358
96 I B 0.2947
97 G B -0.7189
98 K B -1.7791
99 Q B -1.1279
100 S B 0.0000
101 P B -0.7390
102 D B 0.0000
103 I B -0.6736
104 N B -1.5379
105 Q B -2.1686
106 G B 0.0000
107 V B 0.0000
108 D B -3.1280
109 R B -2.9094
110 S B -1.7099
111 D B -1.7754
112 P B -1.3897
113 L B -1.0547
114 K B -2.5728
115 Q B -2.0525
116 G B 0.0000
117 A B 0.0000
118 G B -0.7773
119 D B -0.6682
120 Q B 0.0000
121 G B 0.0000
122 I B 0.0000
123 I B 0.0000
124 F B 0.0000
125 G B 0.0000
126 Y B 0.0000
127 A B 0.0000
128 T B 0.0000
129 N B -2.2451
130 E B -1.8875
131 T B 0.0000
132 E B -1.9553
133 V B -1.0788
134 L B -1.0460
135 M B 0.0000
136 P B 0.0000
137 A B 0.0000
138 P B 0.0000
139 I B 0.0000
140 T B 0.2657
141 Y B 0.2370
142 A B 0.0000
143 H B 0.0000
144 L B 0.2340
145 L B 0.0000
146 V B 0.0000
147 K B -1.1096
148 K B -1.3083
149 Q B 0.0000
150 S B 0.0000
151 E B -2.4987
152 L B 0.0000
153 R B 0.0000
154 K B -2.9316
155 K B -2.7693
156 N B -1.8874
157 I B 0.1600
158 L B -0.1788
159 S B -0.6144
160 W B -0.4159
161 L B 0.0000
162 R B 0.0000
163 P B 0.0000
164 D B 0.0000
165 A B 0.0000
166 K B -0.3233
167 S B 0.0000
168 Q B 0.0000
169 V B 0.0000
170 T B 0.0000
171 F B 0.0000
172 K B -0.7745
173 Y B 0.0000
174 K B -2.3218
175 N B -2.4853
176 G B -2.1697
177 N B -1.9674
178 V B -0.4981
179 I B 0.1873
180 G B 0.0000
181 I B 0.0000
182 D B -1.1765
183 T B 0.0000
184 V B 0.0000
185 V B 0.0000
186 F B 0.0000
187 S B -0.2073
188 T B 0.0000
189 Q B 0.0000
190 H B 0.0000
191 K B -1.9676
192 E B -2.4737
193 S B -1.2880
194 I B -0.6048
195 S B -0.7650
196 Q B -1.4002
197 N B -1.4951
198 I B 0.1655
199 L B 0.0000
200 K B -1.9508
201 E B -2.5887
202 A B -1.6639
203 V B 0.0000
204 M B -1.7230
205 E B -2.9568
206 E B -1.9005
207 I B 0.0000
208 I B 0.0000
209 K B -1.7570
210 P B -1.3217
211 V B 0.0000
212 L B 0.0000
213 P B -1.4700
214 K B -2.5999
215 K B -2.2284
216 W B -0.9357
217 L B -1.7128
218 T B -2.2237
219 K B -2.8515
220 D B -3.0446
221 T B 0.0000
222 K B -2.1889
223 F B -0.5162
224 F B -0.0232
225 I B 0.0000
226 N B 0.0000
227 P B -0.1612
228 T B -0.4806
229 G B -0.9563
230 R B -1.2116
231 F B -0.4655
232 V B 0.0000
233 I B -0.3324
234 G B 0.0000
235 G B 0.0000
236 P B 0.0000
237 M B -0.1201
238 G B 0.0000
239 D B -1.0782
240 C B 0.0000
241 G B 0.0000
242 L B 0.0000
243 T B 0.0000
244 G B 0.0000
245 R B 0.0000
246 K B -0.2753
247 I B 0.0000
248 I B 0.0000
249 V B 0.0000
250 D B 0.0000
251 T B 0.0000
252 Y B 0.0000
253 G B 0.0000
254 G B 0.0000
255 M B -0.0012
256 S B 0.0000
257 R B -0.3067
258 H B 0.0000
259 G B 0.0000
260 G B -0.2751
261 G B -0.3071
262 A B 0.0000
263 F B 0.0000
264 S B 0.0000
265 G B 0.0000
266 K B -0.3352
267 D B 0.0000
268 P B 0.0000
269 S B -0.4726
270 K B -0.6794
271 V B 0.0000
272 D B -0.6153
273 R B 0.0000
274 S B 0.0000
275 A B 0.0000
276 A B 0.0000
277 Y B 0.0000
278 A B 0.0000
279 A B 0.0000
280 R B 0.0000
281 Y B 0.0000
282 V B 0.0000
283 A B 0.0000
284 K B 0.0000
285 N B 0.0000
286 I B 0.0000
287 V B 0.0000
288 A B -0.7649
289 A B -0.5394
290 G B -0.9627
291 L B 0.0000
292 A B 0.0000
293 D B -2.4249
294 R B -1.7388
295 C B 0.0000
296 E B 0.0000
297 I B 0.0000
298 Q B 0.0000
299 L B 0.0000
300 S B 0.0000
301 Y B 0.0000
302 A B 0.0000
303 I B 0.0000
304 G B -1.0066
305 I B -0.7740
306 A B -1.4077
307 E B -2.2998
308 P B -1.0351
309 T B -0.6277
310 S B 0.0000
311 I B -0.1973
312 M B 0.0000
313 I B 0.0000
314 E B -1.1514
315 T B 0.0000
316 F B -0.8246
317 R B -2.2006
318 T B -1.7929
319 G B -1.8634
320 K B -2.0837
321 L B -0.6430
322 S B -0.9045
323 N B -1.4934
324 K B -1.5182
325 V B 0.0854
326 L B 0.0000
327 I B -1.2767
328 N B -2.0443
329 L B -1.4259
330 V B 0.0000
331 R B -2.8956
332 D B -2.8479
333 I B -1.3950
334 F B 0.0000
335 D B -1.7593
336 L B 0.0000
337 R B -1.4578
338 P B 0.0000
339 Y B -0.5875
340 G B 0.0000
341 L B 0.0000
342 I B -0.9570
343 E B -1.9702
344 M B -1.0416
345 L B 0.0000
346 N B -1.8028
347 L B 0.0000
348 L B -0.4052
349 Q B -0.6586
350 P B -0.6195
351 I B -0.4677
352 Y B 0.0000
353 L B -0.1382
354 K B -1.3108
355 T B 0.0000
356 S B 0.0000
357 V B -0.1705
358 Y B -0.1275
359 G B 0.0000
360 H B 0.0000
361 F B 0.0000
362 G B -0.9167
363 R B -1.8000
364 E B -3.0328
365 E B -3.1512
366 F B 0.0000
367 P B -1.5092
368 W B 0.0000
369 E B 0.0000
370 K B -2.3713
371 L B -1.1658
372 D B -2.2248
373 K B -1.5097
374 V B -1.3295
375 D B -2.3059
376 A B -1.6374
377 L B 0.0000
378 S B -1.3561
379 Q B -1.6426
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Laboratory of Theory of Biopolymers 2018