| Chain sequence(s) |
A: GPLPLNPEPEIKSTDDFVEETDLYYIAETDLITETGHPTADIVVDGKVVVPRVSAYQWRVFLLKLPDPNKLPLPSEDFIDPTTHILIWRLKALYIKRFGPLGKGEYGHANFNALGDKDNPTTPQHGGADMTQNLSWRPKLKQMFIVGDLPPTGKYTALAPPSPGLPPGARPPLTVVRTTIQHGDMADIGFGAKDYAKLEPAKNDVPDIILNTTTKEVDYEGMKAEPYGRKMFTYDEYEKSKDIRKLVRNGPDLEPLPDSSPPSPLYTPPSPSSPYAVPEPYNYFTLPDAGEITKEDELFNKPYYFKKSEGKNNFILWHNRLYITVLDNTRAEIETIKTQISTPEENVYDESNYVTSKRYTEEYQLSLIIQLCKIPLTPEILEYLKRLDPRILVDANLPFIPPVERPDPLAGKKFLEIDLTDKLSSDLEKSELGREFLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2364 | |
| 2 | P | A | 0.4631 | |
| 3 | L | A | 1.3718 | |
| 4 | P | A | 0.3867 | |
| 5 | L | A | 0.9123 | |
| 6 | N | A | -1.0613 | |
| 7 | P | A | -1.6336 | |
| 8 | E | A | -2.6769 | |
| 9 | P | A | -2.2899 | |
| 10 | E | A | -2.2761 | |
| 11 | I | A | -1.0352 | |
| 12 | K | A | -1.5265 | |
| 13 | S | A | -1.8681 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.2302 | |
| 16 | D | A | -2.9095 | |
| 17 | F | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | E | A | -2.6714 | |
| 20 | E | A | -2.9664 | |
| 21 | T | A | -1.9183 | |
| 22 | D | A | -1.9278 | |
| 23 | L | A | -0.6209 | |
| 24 | Y | A | -0.0009 | |
| 25 | Y | A | 0.1542 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.1609 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3645 | |
| 31 | L | A | 0.3369 | |
| 32 | I | A | 0.2037 | |
| 33 | T | A | -0.1177 | |
| 34 | E | A | -0.4930 | |
| 35 | T | A | -0.4472 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.8323 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -0.6734 | |
| 40 | A | A | -0.2955 | |
| 41 | D | A | 0.0605 | |
| 42 | I | A | 1.8759 | |
| 43 | V | A | 2.4497 | |
| 44 | V | A | 1.6216 | |
| 45 | D | A | -0.9631 | |
| 46 | G | A | -0.5451 | |
| 47 | K | A | -0.1997 | |
| 48 | V | A | 2.1285 | |
| 49 | V | A | 2.5341 | |
| 50 | V | A | 1.4809 | |
| 51 | P | A | 0.2840 | |
| 52 | R | A | -0.4529 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.0049 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3407 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.7078 | |
| 70 | K | A | -1.8556 | |
| 71 | L | A | -0.6556 | |
| 72 | P | A | -0.4778 | |
| 73 | L | A | -0.3627 | |
| 74 | P | A | -0.4949 | |
| 75 | S | A | -1.4062 | |
| 76 | E | A | -2.7251 | |
| 77 | D | A | -2.7260 | |
| 78 | F | A | -1.3201 | |
| 79 | I | A | -1.3803 | |
| 80 | D | A | -1.9506 | |
| 81 | P | A | -1.1189 | |
| 82 | T | A | -0.4684 | |
| 83 | T | A | -0.6053 | |
| 84 | H | A | -0.8526 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.6443 | |
| 92 | A | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | Y | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | K | A | -0.4142 | |
| 97 | R | A | 0.0000 | |
| 98 | F | A | 0.4640 | |
| 99 | G | A | -0.4111 | |
| 100 | P | A | -0.6676 | |
| 101 | L | A | -0.5921 | |
| 102 | G | A | -1.4027 | |
| 103 | K | A | -2.3850 | |
| 104 | G | A | 0.0000 | |
| 105 | E | A | -2.4930 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -1.2983 | |
| 108 | H | A | -1.6515 | |
| 109 | A | A | -1.6223 | |
| 110 | N | A | -2.6192 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.4055 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -2.2248 | |
| 117 | K | A | -2.4785 | |
| 118 | D | A | -3.3051 | |
| 119 | N | A | -2.8539 | |
| 120 | P | A | -1.7585 | |
| 121 | T | A | -0.9796 | |
| 122 | T | A | -0.4878 | |
| 123 | P | A | -0.2598 | |
| 124 | Q | A | -0.9031 | |
| 125 | H | A | -0.9408 | |
| 126 | G | A | -1.2255 | |
| 127 | G | A | -1.1573 | |
| 128 | A | A | -0.9384 | |
| 129 | D | A | -1.9213 | |
| 130 | M | A | -0.8569 | |
| 131 | T | A | -1.6024 | |
| 132 | Q | A | -2.0704 | |
| 133 | N | A | -2.1936 | |
| 134 | L | A | 0.0000 | |
| 135 | S | A | -1.1528 | |
| 136 | W | A | 0.0000 | |
| 137 | R | A | -1.1462 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | M | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.0529 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.9016 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.9231 | |
| 155 | Y | A | -0.3745 | |
| 156 | T | A | 0.6743 | |
| 157 | A | A | 0.0000 | |
| 158 | L | A | 0.9504 | |
| 159 | A | A | 0.8768 | |
| 160 | P | A | -0.1114 | |
| 161 | P | A | -0.4606 | |
| 162 | S | A | -0.5512 | |
| 163 | P | A | -0.5463 | |
| 164 | G | A | -0.4935 | |
| 165 | L | A | -0.3907 | |
| 166 | P | A | -0.6436 | |
| 167 | P | A | -0.7943 | |
| 168 | G | A | -0.8143 | |
| 169 | A | A | -0.9787 | |
| 170 | R | A | -1.6852 | |
| 171 | P | A | -0.8083 | |
| 172 | P | A | 0.1731 | |
| 173 | L | A | 1.7651 | |
| 174 | T | A | 1.5182 | |
| 175 | V | A | 1.5725 | |
| 176 | V | A | 0.3709 | |
| 177 | R | A | -1.5314 | |
| 178 | T | A | -0.7979 | |
| 179 | T | A | -0.8566 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -1.0683 | |
| 182 | H | A | -1.1142 | |
| 183 | G | A | -0.6684 | |
| 184 | D | A | -0.7214 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.5763 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.5648 | |
| 190 | F | A | -0.0669 | |
| 191 | G | A | -0.4264 | |
| 192 | A | A | -0.5430 | |
| 193 | K | A | -0.7525 | |
| 194 | D | A | -0.9971 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.8540 | |
| 197 | K | A | -2.1231 | |
| 198 | L | A | -1.0430 | |
| 199 | E | A | -1.6953 | |
| 200 | P | A | -1.5356 | |
| 201 | A | A | -1.2612 | |
| 202 | K | A | -2.6914 | |
| 203 | N | A | -1.9073 | |
| 204 | D | A | -1.2768 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.5613 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.4921 | |
| 211 | N | A | -1.9782 | |
| 212 | T | A | -1.0673 | |
| 213 | T | A | -0.8147 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | E | A | -1.2174 | |
| 217 | V | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | Y | A | -1.3333 | |
| 220 | E | A | -2.4241 | |
| 221 | G | A | -1.9044 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.9942 | |
| 224 | A | A | -1.5679 | |
| 225 | E | A | -1.5325 | |
| 226 | P | A | -0.9386 | |
| 227 | Y | A | -0.6167 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | K | A | -0.4903 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.7866 | |
| 234 | Y | A | -0.2768 | |
| 235 | D | A | -0.6598 | |
| 236 | E | A | -0.9838 | |
| 237 | Y | A | -1.0800 | |
| 238 | E | A | -1.6673 | |
| 239 | K | A | -1.8287 | |
| 240 | S | A | -1.8476 | |
| 241 | K | A | -2.2958 | |
| 242 | D | A | -2.2785 | |
| 243 | I | A | -1.1394 | |
| 244 | R | A | -2.0825 | |
| 245 | K | A | -2.3056 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | N | A | -0.9506 | |
| 250 | G | A | -0.8650 | |
| 251 | P | A | -0.7395 | |
| 252 | D | A | -0.6647 | |
| 253 | L | A | 0.0249 | |
| 254 | E | A | -1.2899 | |
| 255 | P | A | -0.9366 | |
| 256 | L | A | -0.2279 | |
| 257 | P | A | -0.9542 | |
| 258 | D | A | -2.0448 | |
| 259 | S | A | -1.3738 | |
| 260 | S | A | -1.2118 | |
| 261 | P | A | -1.0477 | |
| 262 | P | A | -0.7801 | |
| 263 | S | A | -0.2159 | |
| 264 | P | A | 0.4172 | |
| 265 | L | A | 1.5344 | |
| 266 | Y | A | 0.5662 | |
| 267 | T | A | -0.1180 | |
| 268 | P | A | -0.2545 | |
| 269 | P | A | 0.0700 | |
| 270 | S | A | -0.1897 | |
| 271 | P | A | -0.1256 | |
| 272 | S | A | -0.1666 | |
| 273 | S | A | 0.1641 | |
| 274 | P | A | 0.3609 | |
| 275 | Y | A | 1.0054 | |
| 276 | A | A | 0.9149 | |
| 277 | V | A | 1.5285 | |
| 278 | P | A | 0.5395 | |
| 279 | E | A | -0.3998 | |
| 280 | P | A | -0.4769 | |
| 281 | Y | A | -0.0058 | |
| 282 | N | A | -0.3613 | |
| 283 | Y | A | 0.6116 | |
| 284 | F | A | 0.0140 | |
| 285 | T | A | -0.8590 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.6670 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | 0.0000 | |
| 291 | E | A | -1.9581 | |
| 292 | I | A | -1.6614 | |
| 293 | T | A | -2.0005 | |
| 294 | K | A | -2.8992 | |
| 295 | E | A | -3.1629 | |
| 296 | D | A | -2.5280 | |
| 297 | E | A | -1.9409 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -0.9932 | |
| 301 | K | A | -1.1541 | |
| 302 | P | A | -0.6350 | |
| 303 | Y | A | -0.1469 | |
| 304 | Y | A | -0.5181 | |
| 305 | F | A | 0.0000 | |
| 306 | K | A | -2.5222 | |
| 307 | K | A | -3.2853 | |
| 308 | S | A | 0.0000 | |
| 309 | E | A | -2.7910 | |
| 310 | G | A | -2.3762 | |
| 311 | K | A | -2.4590 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | F | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7990 | |
| 319 | N | A | -0.8882 | |
| 320 | R | A | -0.9863 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.8528 | |
| 333 | I | A | -2.1108 | |
| 334 | E | A | -2.0815 | |
| 335 | T | A | -1.1437 | |
| 336 | I | A | 0.1183 | |
| 337 | K | A | -0.6640 | |
| 338 | T | A | 0.1108 | |
| 339 | Q | A | -0.2738 | |
| 340 | I | A | 1.5926 | |
| 341 | S | A | 0.3425 | |
| 342 | T | A | -0.6012 | |
| 343 | P | A | -1.3527 | |
| 344 | E | A | -2.4858 | |
| 345 | E | A | -2.6259 | |
| 346 | N | A | -1.5968 | |
| 347 | V | A | 0.3171 | |
| 348 | Y | A | 0.4429 | |
| 349 | D | A | -1.0039 | |
| 350 | E | A | -1.4043 | |
| 351 | S | A | -0.4723 | |
| 352 | N | A | -0.3796 | |
| 353 | Y | A | 0.4226 | |
| 354 | V | A | 1.3428 | |
| 355 | T | A | -0.0727 | |
| 356 | S | A | -0.5080 | |
| 357 | K | A | -1.6782 | |
| 358 | R | A | -1.5008 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.7704 | |
| 361 | E | A | 0.0000 | |
| 362 | E | A | -0.1068 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.4067 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | I | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -1.1277 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6774 | |
| 376 | L | A | -0.5074 | |
| 377 | T | A | -0.9109 | |
| 378 | P | A | -1.5196 | |
| 379 | E | A | -2.4568 | |
| 380 | I | A | 0.0000 | |
| 381 | L | A | -1.8328 | |
| 382 | E | A | -3.1322 | |
| 383 | Y | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | K | A | -2.6685 | |
| 386 | R | A | -2.0223 | |
| 387 | L | A | 0.0000 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -1.3884 | |
| 390 | R | A | -1.3873 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.8393 | |
| 394 | D | A | -1.7069 | |
| 395 | A | A | -1.5264 | |
| 396 | N | A | -1.4247 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.4112 | |
| 399 | F | A | 1.7505 | |
| 400 | I | A | 0.9813 | |
| 401 | P | A | 0.3970 | |
| 402 | P | A | -0.2350 | |
| 403 | V | A | 0.2752 | |
| 404 | E | A | -1.9289 | |
| 405 | R | A | -2.2561 | |
| 406 | P | A | -1.6039 | |
| 407 | D | A | -1.4750 | |
| 408 | P | A | -0.8955 | |
| 409 | L | A | -0.7182 | |
| 410 | A | A | -0.9186 | |
| 411 | G | A | -1.3008 | |
| 412 | K | A | -1.8518 | |
| 413 | K | A | -2.4385 | |
| 414 | F | A | -1.3606 | |
| 415 | L | A | -1.0985 | |
| 416 | E | A | -2.3407 | |
| 417 | I | A | -1.8441 | |
| 418 | D | A | -2.8074 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.7927 | |
| 421 | D | A | -2.4572 | |
| 422 | K | A | -2.0897 | |
| 423 | L | A | -0.8240 | |
| 424 | S | A | -1.0822 | |
| 425 | S | A | -0.7560 | |
| 426 | D | A | -1.8893 | |
| 427 | L | A | -1.8958 | |
| 428 | E | A | -3.3416 | |
| 429 | K | A | -3.2627 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.1898 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -3.0146 | |
| 435 | E | A | -2.0755 | |
| 436 | F | A | -1.0925 | |
| 437 | L | A | -0.5978 | |
| 438 | N | A | -1.9643 | |
| 439 | R | A | -2.2190 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine