| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHPGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPDGHPLPAAPPPSPLYVPPPPTSPHAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEDNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9501 | |
| 2 | L | A | 1.9721 | |
| 3 | P | A | 0.6482 | |
| 4 | P | A | 0.3681 | |
| 5 | T | A | 0.1202 | |
| 6 | T | A | 0.1262 | |
| 7 | P | A | 0.1863 | |
| 8 | V | A | 1.2180 | |
| 9 | A | A | 0.0342 | |
| 10 | K | A | -1.1546 | |
| 11 | V | A | -0.4086 | |
| 12 | Q | A | -1.5194 | |
| 13 | S | A | -1.6004 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4253 | |
| 16 | E | A | -2.4407 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4495 | |
| 20 | P | A | 0.1016 | |
| 21 | T | A | 0.1146 | |
| 22 | S | A | -0.1695 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1061 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2745 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8686 | |
| 31 | R | A | -2.6354 | |
| 32 | L | A | -0.7658 | |
| 33 | L | A | 1.1716 | |
| 34 | T | A | 1.3580 | |
| 35 | V | A | 1.7986 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2361 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6277 | |
| 40 | K | A | -1.6341 | |
| 41 | D | A | -0.9152 | |
| 42 | I | A | 0.8264 | |
| 43 | V | A | 0.8899 | |
| 44 | K | A | -1.4364 | |
| 45 | D | A | -2.4439 | |
| 46 | G | A | -1.4845 | |
| 47 | K | A | -1.1031 | |
| 48 | V | A | 1.4215 | |
| 49 | V | A | 1.9939 | |
| 50 | V | A | 1.2710 | |
| 51 | P | A | 0.4599 | |
| 52 | K | A | -0.6375 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1523 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4913 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2779 | |
| 70 | K | A | -1.8230 | |
| 71 | F | A | -0.6788 | |
| 72 | A | A | -0.5724 | |
| 73 | L | A | -0.8559 | |
| 74 | P | A | -1.2583 | |
| 75 | Q | A | -2.4751 | |
| 76 | K | A | -3.0946 | |
| 77 | D | A | -2.9913 | |
| 78 | F | A | -1.6386 | |
| 79 | Y | A | -1.9247 | |
| 80 | D | A | -2.7661 | |
| 81 | P | A | -2.3474 | |
| 82 | E | A | -3.0672 | |
| 83 | K | A | -3.4356 | |
| 84 | E | A | -2.4951 | |
| 85 | R | A | -1.3107 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6416 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0050 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3313 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6761 | |
| 99 | G | A | -0.5478 | |
| 100 | P | A | -0.4356 | |
| 101 | L | A | -0.0118 | |
| 102 | G | A | -0.2523 | |
| 103 | K | A | -0.6791 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4490 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1406 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4081 | |
| 110 | L | A | 0.2910 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1760 | |
| 113 | K | A | -0.5484 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.6605 | |
| 117 | T | A | -1.2464 | |
| 118 | E | A | -2.5450 | |
| 119 | N | A | -2.6553 | |
| 120 | P | A | -2.1255 | |
| 121 | T | A | -1.6880 | |
| 122 | E | A | -2.2404 | |
| 123 | P | A | -1.4609 | |
| 124 | V | A | -0.7800 | |
| 125 | H | A | -1.1815 | |
| 126 | P | A | -1.3010 | |
| 127 | G | A | -1.5166 | |
| 128 | A | A | -1.2956 | |
| 129 | D | A | -2.2768 | |
| 130 | D | A | -1.7779 | |
| 131 | R | A | -1.1873 | |
| 132 | V | A | 0.2041 | |
| 133 | A | A | 0.4312 | |
| 134 | F | A | 0.2710 | |
| 135 | S | A | -0.0753 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6854 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5528 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2500 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1391 | |
| 157 | D | A | 0.3199 | |
| 158 | L | A | 0.8078 | |
| 159 | A | A | 0.1675 | |
| 160 | E | A | -1.4505 | |
| 161 | P | A | -0.2184 | |
| 162 | C | A | 0.1862 | |
| 163 | P | A | -0.1641 | |
| 164 | G | A | -0.0690 | |
| 165 | L | A | 0.6072 | |
| 166 | P | A | -0.1113 | |
| 167 | P | A | -0.3397 | |
| 168 | G | A | -0.4169 | |
| 169 | A | A | -0.0105 | |
| 170 | C | A | 0.6644 | |
| 171 | P | A | 0.5211 | |
| 172 | P | A | 0.6663 | |
| 173 | I | A | 1.9499 | |
| 174 | Q | A | 0.8270 | |
| 175 | L | A | 1.4871 | |
| 176 | V | A | 0.8393 | |
| 177 | N | A | -0.3478 | |
| 178 | S | A | 0.0047 | |
| 179 | V | A | 0.3818 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3512 | |
| 182 | D | A | 0.0499 | |
| 183 | G | A | -0.1716 | |
| 184 | D | A | -0.5685 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1601 | |
| 190 | F | A | 0.0670 | |
| 191 | G | A | -0.0984 | |
| 192 | N | A | -0.2722 | |
| 193 | M | A | -0.1406 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4071 | |
| 197 | E | A | -2.5948 | |
| 198 | L | A | -1.2137 | |
| 199 | Q | A | -2.5460 | |
| 200 | Q | A | -3.3299 | |
| 201 | D | A | -3.6038 | |
| 202 | R | A | -3.3510 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1650 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3807 | |
| 211 | S | A | -1.9023 | |
| 212 | T | A | -1.4608 | |
| 213 | R | A | -2.1218 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1779 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2890 | |
| 220 | L | A | 0.4886 | |
| 221 | K | A | -1.3344 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9733 | |
| 224 | N | A | -1.5903 | |
| 225 | E | A | -1.3456 | |
| 226 | A | A | -0.6827 | |
| 227 | Y | A | -0.4613 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7039 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1311 | |
| 234 | F | A | 0.0433 | |
| 235 | G | A | -0.9523 | |
| 236 | R | A | -2.7584 | |
| 237 | R | A | -3.1107 | |
| 238 | E | A | -2.2481 | |
| 239 | Q | A | -0.1840 | |
| 240 | V | A | 1.5529 | |
| 241 | Y | A | 1.2541 | |
| 242 | A | A | 0.1477 | |
| 243 | R | A | -1.1833 | |
| 244 | H | A | -1.2373 | |
| 245 | F | A | -0.2736 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7505 | |
| 249 | S | A | -1.2450 | |
| 250 | G | A | -1.0769 | |
| 251 | P | A | -1.0142 | |
| 252 | D | A | -1.3411 | |
| 253 | G | A | -1.2646 | |
| 254 | H | A | -1.4224 | |
| 255 | P | A | -0.9277 | |
| 256 | L | A | 0.4645 | |
| 257 | P | A | 0.1022 | |
| 258 | A | A | 0.0075 | |
| 259 | A | A | 0.3555 | |
| 260 | P | A | -0.2212 | |
| 261 | P | A | 0.0228 | |
| 262 | P | A | 0.0791 | |
| 263 | S | A | 0.5941 | |
| 264 | P | A | 0.7017 | |
| 265 | L | A | 1.9177 | |
| 266 | Y | A | 1.7906 | |
| 267 | V | A | 1.9530 | |
| 268 | P | A | 0.8670 | |
| 269 | P | A | 0.1458 | |
| 270 | P | A | -0.4345 | |
| 271 | P | A | -0.3867 | |
| 272 | T | A | -0.5083 | |
| 273 | S | A | -0.4498 | |
| 274 | P | A | -0.5755 | |
| 275 | H | A | -0.7444 | |
| 276 | A | A | 0.1156 | |
| 277 | V | A | 1.2212 | |
| 278 | P | A | 0.3470 | |
| 279 | P | A | -0.2433 | |
| 280 | P | A | -0.5057 | |
| 281 | T | A | -0.4149 | |
| 282 | D | A | -0.7404 | |
| 283 | Y | A | 0.9270 | |
| 284 | F | A | 0.7400 | |
| 285 | G | A | 0.0969 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8405 | |
| 291 | L | A | 1.6478 | |
| 292 | V | A | 0.6568 | |
| 293 | S | A | -0.1478 | |
| 294 | S | A | -0.9687 | |
| 295 | D | A | -1.8383 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.2013 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7091 | |
| 301 | R | A | -2.0437 | |
| 302 | P | A | -1.0472 | |
| 303 | F | A | -0.2289 | |
| 304 | W | A | -0.5388 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0808 | |
| 307 | R | A | -2.9249 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6549 | |
| 310 | G | A | -1.4242 | |
| 311 | N | A | -1.3962 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9133 | |
| 319 | N | A | -0.8967 | |
| 320 | E | A | -1.0554 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3632 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1057 | |
| 333 | N | A | 0.5361 | |
| 334 | F | A | 1.7338 | |
| 335 | T | A | 0.8767 | |
| 336 | I | A | 0.4683 | |
| 337 | S | A | -0.9351 | |
| 338 | Q | A | -1.6995 | |
| 339 | Q | A | -1.2274 | |
| 340 | L | A | 0.7067 | |
| 341 | C | A | 0.3258 | |
| 342 | T | A | -0.3312 | |
| 343 | P | A | -1.0047 | |
| 344 | E | A | -2.5147 | |
| 345 | D | A | -2.5776 | |
| 346 | N | A | -1.5991 | |
| 347 | V | A | 0.5254 | |
| 348 | Y | A | 0.9608 | |
| 349 | D | A | -0.1152 | |
| 350 | P | A | -0.3683 | |
| 351 | S | A | -0.2984 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7412 | |
| 354 | K | A | -1.7666 | |
| 355 | N | A | -1.7567 | |
| 356 | Y | A | -0.0665 | |
| 357 | L | A | 0.6461 | |
| 358 | R | A | 0.9551 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3602 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0193 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9061 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6598 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2797 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3224 | |
| 376 | L | A | -1.7457 | |
| 377 | D | A | -2.0270 | |
| 378 | P | A | -1.0606 | |
| 379 | G | A | -1.0190 | |
| 380 | V | A | -0.9301 | |
| 381 | L | A | -0.5416 | |
| 382 | A | A | -0.6589 | |
| 383 | H | A | -0.8447 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3915 | |
| 386 | T | A | -0.5705 | |
| 387 | M | A | -0.3279 | |
| 388 | N | A | -0.8635 | |
| 389 | P | A | -1.2662 | |
| 390 | T | A | -1.5201 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5220 | |
| 393 | E | A | -2.8970 | |
| 394 | N | A | -2.6428 | |
| 395 | W | A | -1.5120 | |
| 396 | N | A | -1.3358 | |
| 397 | L | A | -0.1960 | |
| 398 | G | A | 0.5453 | |
| 399 | F | A | 2.4209 | |
| 400 | V | A | 1.8378 | |
| 401 | P | A | 0.0512 | |
| 402 | P | A | -1.8979 | |
| 403 | K | A | -3.4898 | |
| 404 | E | A | -3.8308 | |
| 405 | R | A | -4.0728 | |
| 406 | E | A | -3.8294 | |
| 407 | D | A | -2.8835 | |
| 408 | P | A | -1.7689 | |
| 409 | Y | A | -0.9934 | |
| 410 | K | A | -2.1007 | |
| 411 | G | A | -0.6408 | |
| 412 | L | A | 0.6503 | |
| 413 | I | A | 1.5660 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4082 | |
| 416 | E | A | -1.6893 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9437 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0714 | |
| 421 | E | A | -2.7859 | |
| 422 | R | A | -2.6425 | |
| 423 | F | A | -1.3008 | |
| 424 | S | A | -1.4714 | |
| 425 | Q | A | -1.9207 | |
| 426 | D | A | -2.9069 | |
| 427 | L | A | -2.0059 | |
| 428 | D | A | -2.8068 | |
| 429 | Q | A | -2.6279 | |
| 430 | F | A | -1.4457 | |
| 431 | A | A | -0.8931 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5511 | |
| 435 | K | A | -0.7114 | |
| 436 | F | A | 0.1568 | |
| 437 | L | A | 1.0352 | |
| 438 | Y | A | 0.8328 | |
| 439 | Q | A | -0.2594 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine