Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARGGHGYFDLWGRGTLVTVSS
L: EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYHHSPLTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07) [INFO] Main: Simulation completed successfully. (00:01:08) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | H | -1.8818 | |
2 | V | H | -0.7961 | |
3 | Q | H | -1.1401 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.0994 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.3910 | |
8 | G | H | -0.5599 | |
9 | G | H | 0.2501 | |
11 | G | H | 0.8367 | |
12 | L | H | 1.4127 | |
13 | V | H | -0.0213 | |
14 | Q | H | -1.3110 | |
15 | P | H | -1.5709 | |
16 | G | H | -1.3897 | |
17 | G | H | -0.9572 | |
18 | S | H | -1.1095 | |
19 | L | H | -0.7019 | |
20 | R | H | -1.5206 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.3556 | |
23 | C | H | 0.0000 | |
24 | A | H | -0.3653 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.7935 | |
27 | G | H | -1.0026 | |
28 | F | H | -0.3585 | |
29 | T | H | -0.1904 | |
30 | F | H | 0.0000 | |
35 | S | H | -0.7033 | |
36 | S | H | -0.2086 | |
37 | Y | H | -0.0499 | |
38 | S | H | -0.1977 | |
39 | M | H | 0.0000 | |
40 | N | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.5899 | |
45 | A | H | -1.0106 | |
46 | P | H | -0.7884 | |
47 | G | H | -1.4574 | |
48 | K | H | -2.2725 | |
49 | G | H | -1.3664 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.8862 | |
52 | W | H | 0.0000 | |
53 | V | H | 0.0000 | |
54 | S | H | 0.0000 | |
55 | Y | H | 0.6279 | |
56 | I | H | 0.0000 | |
57 | S | H | -0.0182 | |
58 | S | H | -0.4218 | |
59 | S | H | -0.4324 | |
62 | S | H | -0.3161 | |
63 | S | H | -0.1681 | |
64 | T | H | 0.4472 | |
65 | I | H | 1.3021 | |
66 | Y | H | 1.0216 | |
67 | Y | H | -0.3210 | |
68 | A | H | 0.0000 | |
69 | D | H | -2.4413 | |
70 | S | H | -1.8266 | |
71 | V | H | 0.0000 | |
72 | K | H | -2.5316 | |
74 | G | H | -1.7822 | |
75 | R | H | -1.6858 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.5596 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.2255 | |
80 | R | H | -0.9203 | |
81 | D | H | -1.4265 | |
82 | N | H | -1.5818 | |
83 | A | H | -1.3411 | |
84 | K | H | -2.2578 | |
85 | N | H | -1.7497 | |
86 | S | H | -1.0635 | |
87 | L | H | 0.0000 | |
88 | Y | H | -0.4124 | |
89 | L | H | 0.0000 | |
90 | Q | H | -1.0351 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.2878 | |
93 | S | H | -1.2112 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.2420 | |
96 | A | H | -1.6849 | |
97 | E | H | -2.2146 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.3513 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.7926 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.4130 | |
107 | G | H | 0.0000 | |
108 | G | H | 0.0000 | |
109 | H | H | -0.9386 | |
113 | G | H | 0.0000 | |
114 | Y | H | -0.0583 | |
115 | F | H | 0.0000 | |
116 | D | H | -0.7360 | |
117 | L | H | -0.3600 | |
118 | W | H | 0.0000 | |
119 | G | H | 0.0000 | |
120 | R | H | -2.0163 | |
121 | G | H | -0.6043 | |
122 | T | H | 0.3725 | |
123 | L | H | 1.7275 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.3397 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.7348 | |
128 | S | H | -0.5581 | |
1 | E | L | -1.7694 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.7078 | |
4 | L | L | 0.0000 | |
5 | T | L | -0.6235 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.8777 | |
8 | P | L | -0.5985 | |
9 | G | L | -0.8781 | |
10 | T | L | -0.6913 | |
11 | L | L | -0.1989 | |
12 | S | L | -0.1770 | |
13 | L | L | -0.5456 | |
14 | S | L | -1.0874 | |
15 | P | L | -1.5286 | |
16 | G | L | -2.3176 | |
17 | E | L | -3.0207 | |
18 | R | L | -3.3342 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.6732 | |
21 | L | L | 0.0000 | |
22 | S | L | -0.8866 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.2876 | |
25 | A | L | 0.0000 | |
26 | S | L | -1.0326 | |
27 | Q | L | -1.8253 | |
28 | S | L | -1.4875 | |
29 | V | L | 0.0000 | |
30 | S | L | -0.5749 | |
36 | S | L | -0.2533 | |
37 | S | L | -0.2293 | |
38 | Y | L | 0.2528 | |
39 | L | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.3163 | |
46 | P | L | -0.9850 | |
47 | G | L | -1.5001 | |
48 | Q | L | -2.1186 | |
49 | A | L | -1.4151 | |
50 | P | L | 0.0000 | |
51 | R | L | -0.9911 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.1472 | |
56 | G | L | 0.0083 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.4914 | |
66 | S | L | -0.5591 | |
67 | R | L | -1.2947 | |
68 | A | L | -0.7280 | |
69 | T | L | -0.6002 | |
70 | G | L | -0.8707 | |
71 | I | L | 0.0000 | |
72 | P | L | -1.3122 | |
74 | D | L | -2.4035 | |
75 | R | L | -2.0211 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.8978 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.6218 | |
80 | G | L | -1.0062 | |
83 | S | L | -0.9574 | |
84 | G | L | -1.1412 | |
85 | T | L | -1.7027 | |
86 | D | L | -2.0141 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.7152 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.8325 | |
91 | I | L | 0.0000 | |
92 | S | L | -2.5526 | |
93 | R | L | -3.5783 | |
94 | L | L | 0.0000 | |
95 | E | L | -1.9572 | |
96 | P | L | -1.1053 | |
97 | E | L | -1.6711 | |
98 | D | L | 0.0000 | |
99 | F | L | -0.1850 | |
100 | A | L | 0.0000 | |
101 | V | L | -0.2094 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | Y | L | 0.0000 | |
108 | H | L | -0.7281 | |
109 | H | L | -1.4170 | |
114 | S | L | -0.8590 | |
115 | P | L | -0.9634 | |
116 | L | L | -0.1768 | |
117 | T | L | -0.1292 | |
118 | F | L | 0.2278 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.6919 | |
121 | G | L | -0.8107 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.9494 | |
124 | V | L | 0.0000 | |
125 | E | L | 0.0164 | |
126 | I | L | 0.9114 | |
127 | K | L | -0.8008 |