Project name: 47cdad2b584c1c3

Status: done

Started: 2025-06-03 04:54:01
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSYISSSSSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARGGHGYFDLWGRGTLVTVSS
L: EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYHHSPLTFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:08)
Show buried residues

Minimal score value
-3.5783
Maximal score value
1.7275
Average score
-0.5714
Total score value
-128.5557

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.8818
2 V H -0.7961
3 Q H -1.1401
4 L H 0.0000
5 V H 0.0994
6 E H 0.0000
7 S H -0.3910
8 G H -0.5599
9 G H 0.2501
11 G H 0.8367
12 L H 1.4127
13 V H -0.0213
14 Q H -1.3110
15 P H -1.5709
16 G H -1.3897
17 G H -0.9572
18 S H -1.1095
19 L H -0.7019
20 R H -1.5206
21 L H 0.0000
22 S H -0.3556
23 C H 0.0000
24 A H -0.3653
25 A H 0.0000
26 S H -0.7935
27 G H -1.0026
28 F H -0.3585
29 T H -0.1904
30 F H 0.0000
35 S H -0.7033
36 S H -0.2086
37 Y H -0.0499
38 S H -0.1977
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.5899
45 A H -1.0106
46 P H -0.7884
47 G H -1.4574
48 K H -2.2725
49 G H -1.3664
50 L H 0.0000
51 E H -0.8862
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 Y H 0.6279
56 I H 0.0000
57 S H -0.0182
58 S H -0.4218
59 S H -0.4324
62 S H -0.3161
63 S H -0.1681
64 T H 0.4472
65 I H 1.3021
66 Y H 1.0216
67 Y H -0.3210
68 A H 0.0000
69 D H -2.4413
70 S H -1.8266
71 V H 0.0000
72 K H -2.5316
74 G H -1.7822
75 R H -1.6858
76 F H 0.0000
77 T H -0.5596
78 I H 0.0000
79 S H -0.2255
80 R H -0.9203
81 D H -1.4265
82 N H -1.5818
83 A H -1.3411
84 K H -2.2578
85 N H -1.7497
86 S H -1.0635
87 L H 0.0000
88 Y H -0.4124
89 L H 0.0000
90 Q H -1.0351
91 M H 0.0000
92 N H -1.2878
93 S H -1.2112
94 L H 0.0000
95 R H -2.2420
96 A H -1.6849
97 E H -2.2146
98 D H 0.0000
99 T H -0.3513
100 A H 0.0000
101 V H 0.7926
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.4130
107 G H 0.0000
108 G H 0.0000
109 H H -0.9386
113 G H 0.0000
114 Y H -0.0583
115 F H 0.0000
116 D H -0.7360
117 L H -0.3600
118 W H 0.0000
119 G H 0.0000
120 R H -2.0163
121 G H -0.6043
122 T H 0.3725
123 L H 1.7275
124 V H 0.0000
125 T H 0.3397
126 V H 0.0000
127 S H -0.7348
128 S H -0.5581
1 E L -1.7694
2 I L 0.0000
3 V L 0.7078
4 L L 0.0000
5 T L -0.6235
6 Q L 0.0000
7 S L -0.8777
8 P L -0.5985
9 G L -0.8781
10 T L -0.6913
11 L L -0.1989
12 S L -0.1770
13 L L -0.5456
14 S L -1.0874
15 P L -1.5286
16 G L -2.3176
17 E L -3.0207
18 R L -3.3342
19 A L 0.0000
20 T L -0.6732
21 L L 0.0000
22 S L -0.8866
23 C L 0.0000
24 R L -2.2876
25 A L 0.0000
26 S L -1.0326
27 Q L -1.8253
28 S L -1.4875
29 V L 0.0000
30 S L -0.5749
36 S L -0.2533
37 S L -0.2293
38 Y L 0.2528
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.3163
46 P L -0.9850
47 G L -1.5001
48 Q L -2.1186
49 A L -1.4151
50 P L 0.0000
51 R L -0.9911
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.1472
56 G L 0.0083
57 A L 0.0000
65 S L -0.4914
66 S L -0.5591
67 R L -1.2947
68 A L -0.7280
69 T L -0.6002
70 G L -0.8707
71 I L 0.0000
72 P L -1.3122
74 D L -2.4035
75 R L -2.0211
76 F L 0.0000
77 S L -0.8978
78 G L 0.0000
79 S L -0.6218
80 G L -1.0062
83 S L -0.9574
84 G L -1.1412
85 T L -1.7027
86 D L -2.0141
87 F L 0.0000
88 T L -0.7152
89 L L 0.0000
90 T L -0.8325
91 I L 0.0000
92 S L -2.5526
93 R L -3.5783
94 L L 0.0000
95 E L -1.9572
96 P L -1.1053
97 E L -1.6711
98 D L 0.0000
99 F L -0.1850
100 A L 0.0000
101 V L -0.2094
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 H L -0.7281
109 H L -1.4170
114 S L -0.8590
115 P L -0.9634
116 L L -0.1768
117 T L -0.1292
118 F L 0.2278
119 G L 0.0000
120 G L -0.6919
121 G L -0.8107
122 T L 0.0000
123 K L -0.9494
124 V L 0.0000
125 E L 0.0164
126 I L 0.9114
127 K L -0.8008
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Laboratory of Theory of Biopolymers 2018