| Chain sequence(s) |
A: MKKTAIAIAVALAGFATVAQAAVDNKFNKEAIFASIEIINLPNLNGHQVHAFIRSLSDDPSQSANLLAEAKKLNDAQAPKGQAGQHHHHHHGAYPYDVPDYAS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.2084 | |
| 2 | K | A | -1.9932 | |
| 3 | K | A | -2.0775 | |
| 4 | T | A | -0.7330 | |
| 5 | A | A | 0.6199 | |
| 6 | I | A | 2.4151 | |
| 7 | A | A | 2.2332 | |
| 8 | I | A | 3.1355 | |
| 9 | A | A | 2.3509 | |
| 10 | V | A | 2.7671 | |
| 11 | A | A | 1.8643 | |
| 12 | L | A | 2.2693 | |
| 13 | A | A | 1.4935 | |
| 14 | G | A | 1.1584 | |
| 15 | F | A | 2.2619 | |
| 16 | A | A | 1.4972 | |
| 17 | T | A | 1.0237 | |
| 18 | V | A | 1.6966 | |
| 19 | A | A | 0.2986 | |
| 20 | Q | A | -0.3331 | |
| 21 | A | A | 0.1216 | |
| 22 | A | A | -0.1601 | |
| 23 | V | A | 0.2616 | |
| 24 | D | A | -1.8403 | |
| 25 | N | A | -2.3445 | |
| 26 | K | A | -2.0245 | |
| 27 | F | A | -0.4966 | |
| 28 | N | A | -2.2555 | |
| 29 | K | A | -2.1770 | |
| 30 | E | A | -1.8767 | |
| 31 | A | A | 0.0000 | |
| 32 | I | A | 0.4628 | |
| 33 | F | A | 1.2017 | |
| 34 | A | A | 0.0000 | |
| 35 | S | A | 0.7217 | |
| 36 | I | A | 1.6570 | |
| 37 | E | A | -0.1038 | |
| 38 | I | A | 0.0000 | |
| 39 | I | A | 1.1264 | |
| 40 | N | A | -0.4468 | |
| 41 | L | A | -0.6670 | |
| 42 | P | A | -0.8650 | |
| 43 | N | A | -1.3967 | |
| 44 | L | A | 0.0000 | |
| 45 | N | A | -1.8179 | |
| 46 | G | A | -1.5648 | |
| 47 | H | A | -1.9273 | |
| 48 | Q | A | -1.3164 | |
| 49 | V | A | -0.9126 | |
| 50 | H | A | -1.6326 | |
| 51 | A | A | -1.2869 | |
| 52 | F | A | 0.0000 | |
| 53 | I | A | -0.6577 | |
| 54 | R | A | -2.5565 | |
| 55 | S | A | -1.9486 | |
| 56 | L | A | 0.0000 | |
| 57 | S | A | -1.6538 | |
| 58 | D | A | -2.8458 | |
| 59 | D | A | -2.2111 | |
| 60 | P | A | -1.9398 | |
| 61 | S | A | -1.5161 | |
| 62 | Q | A | -1.8687 | |
| 63 | S | A | 0.0000 | |
| 64 | A | A | -1.0471 | |
| 65 | N | A | -1.7993 | |
| 66 | L | A | -1.5004 | |
| 67 | L | A | -1.0180 | |
| 68 | A | A | -1.7744 | |
| 69 | E | A | -2.9415 | |
| 70 | A | A | 0.0000 | |
| 71 | K | A | -2.8358 | |
| 72 | K | A | -3.1979 | |
| 73 | L | A | -1.9016 | |
| 74 | N | A | 0.0000 | |
| 75 | D | A | -3.0831 | |
| 76 | A | A | -1.7976 | |
| 77 | Q | A | -1.8162 | |
| 78 | A | A | -1.7044 | |
| 79 | P | A | -1.8190 | |
| 80 | K | A | -2.6446 | |
| 81 | G | A | -2.0233 | |
| 82 | Q | A | -2.4630 | |
| 83 | A | A | -1.6511 | |
| 84 | G | A | -1.9862 | |
| 85 | Q | A | -2.6824 | |
| 86 | H | A | -2.8128 | |
| 87 | H | A | -2.8583 | |
| 88 | H | A | -2.8968 | |
| 89 | H | A | -2.7278 | |
| 90 | H | A | -2.4547 | |
| 91 | H | A | -1.9194 | |
| 92 | G | A | -0.8132 | |
| 93 | A | A | 0.2979 | |
| 94 | Y | A | 1.1195 | |
| 95 | P | A | 0.7112 | |
| 96 | Y | A | 1.1989 | |
| 97 | D | A | -0.5165 | |
| 98 | V | A | 0.8388 | |
| 99 | P | A | -0.1997 | |
| 100 | D | A | -1.0791 | |
| 101 | Y | A | 0.6029 | |
| 102 | A | A | 0.0182 | |
| 103 | S | A | -0.0606 |