| Chain sequence(s) |
A: LTTYTATTTLWGHTLTCQVQQLGTTVTGQLLFDGQPMQGAETTYDSAKNQVTVTLNFEVDEQPVTVTCVLDMTTQKATFTVAHPGSKQVFVDTADVTVTS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:07)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:07)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:07)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:07)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:07)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.7215 | |
| 2 | T | A | 0.8852 | |
| 3 | T | A | 0.3648 | |
| 4 | Y | A | -0.2325 | |
| 5 | T | A | -0.5016 | |
| 6 | A | A | 0.0000 | |
| 7 | T | A | -0.3837 | |
| 8 | T | A | 0.0000 | |
| 9 | T | A | -0.2173 | |
| 10 | L | A | 0.5446 | |
| 11 | W | A | 0.8216 | |
| 12 | G | A | -0.2977 | |
| 13 | H | A | -0.6783 | |
| 14 | T | A | -0.6462 | |
| 15 | L | A | 0.0000 | |
| 16 | T | A | -0.4786 | |
| 17 | C | A | 0.0000 | |
| 18 | Q | A | -0.6762 | |
| 19 | V | A | 0.0000 | |
| 20 | Q | A | -0.1672 | |
| 21 | Q | A | 0.5776 | |
| 22 | L | A | 1.6173 | |
| 23 | G | A | 0.4285 | |
| 24 | T | A | 0.1384 | |
| 25 | T | A | 0.4463 | |
| 26 | V | A | 0.3989 | |
| 27 | T | A | -0.4125 | |
| 28 | G | A | -0.9160 | |
| 29 | Q | A | -1.4371 | |
| 30 | L | A | 0.0000 | |
| 31 | L | A | -0.7281 | |
| 32 | F | A | -0.4206 | |
| 33 | D | A | -1.5627 | |
| 34 | G | A | -1.3872 | |
| 35 | Q | A | -1.7084 | |
| 36 | P | A | -1.2649 | |
| 37 | M | A | -0.9740 | |
| 38 | Q | A | -1.8633 | |
| 39 | G | A | -1.6550 | |
| 40 | A | A | -1.7187 | |
| 41 | E | A | -2.3120 | |
| 42 | T | A | -0.9560 | |
| 43 | T | A | -0.4605 | |
| 44 | Y | A | -0.3913 | |
| 45 | D | A | -1.3706 | |
| 46 | S | A | -1.2080 | |
| 47 | A | A | -1.2182 | |
| 48 | K | A | -2.2665 | |
| 49 | N | A | -1.7122 | |
| 50 | Q | A | -1.5181 | |
| 51 | V | A | 0.0000 | |
| 52 | T | A | -0.3575 | |
| 53 | V | A | 0.0000 | |
| 54 | T | A | -1.0102 | |
| 55 | L | A | 0.0000 | |
| 56 | N | A | -1.6763 | |
| 57 | F | A | -0.8841 | |
| 58 | E | A | -2.1672 | |
| 59 | V | A | -0.7105 | |
| 60 | D | A | -2.5321 | |
| 61 | E | A | -3.0336 | |
| 62 | Q | A | -2.3869 | |
| 63 | P | A | -1.7077 | |
| 64 | V | A | -0.6736 | |
| 65 | T | A | -0.3877 | |
| 66 | V | A | 0.0000 | |
| 67 | T | A | -0.0915 | |
| 68 | C | A | 0.0000 | |
| 69 | V | A | 0.0846 | |
| 70 | L | A | 0.0000 | |
| 71 | D | A | -1.6553 | |
| 72 | M | A | 0.0000 | |
| 73 | T | A | -1.0300 | |
| 74 | T | A | -1.2549 | |
| 75 | Q | A | -1.8390 | |
| 76 | K | A | -2.4885 | |
| 77 | A | A | 0.0000 | |
| 78 | T | A | -0.2945 | |
| 79 | F | A | 0.0000 | |
| 80 | T | A | 1.1713 | |
| 81 | V | A | 0.0000 | |
| 82 | A | A | 0.2543 | |
| 83 | H | A | -0.9818 | |
| 84 | P | A | -1.2211 | |
| 85 | G | A | -1.7043 | |
| 86 | S | A | -1.4527 | |
| 87 | K | A | -2.0242 | |
| 88 | Q | A | -0.9128 | |
| 89 | V | A | 1.5969 | |
| 90 | F | A | 2.0322 | |
| 91 | V | A | 2.1929 | |
| 92 | D | A | 0.3402 | |
| 93 | T | A | -0.6104 | |
| 94 | A | A | -1.5498 | |
| 95 | D | A | -2.4575 | |
| 96 | V | A | 0.0000 | |
| 97 | T | A | -0.4215 | |
| 98 | V | A | 0.3855 | |
| 99 | T | A | 0.3797 | |
| 100 | S | A | 0.4455 |