Project name: query_structure

Status: done

Started: 2026-03-17 00:16:55
Settings
Chain sequence(s) A: NGLPVCGETCVGGTCNTPGCSCSRPVCT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:12)
Show buried residues

Minimal score value
-1.4894
Maximal score value
1.7217
Average score
-0.1102
Total score value
-3.087

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -1.2043
2 G A -0.1395
3 L A 1.2993
4 P A 0.9453
5 V A 1.7217
6 C A 0.0000
7 G A 0.1143
8 E A -0.3844
9 T A -0.0063
10 C A 0.0000
11 V A 1.2528
12 G A 0.0183
13 G A -0.3314
14 T A -0.4096
15 C A -0.6602
16 N A -1.4894
17 T A -0.7634
18 P A -0.8003
19 G A -0.4764
20 C A -0.3240
21 S A -0.3438
22 C A -0.1487
23 S A -0.5334
24 R A -1.1875
25 P A -0.3025
26 V A 0.7612
27 C A 0.0000
28 T A 0.3052
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Laboratory of Theory of Biopolymers 2018