Project name: 483e54a0b53168b

Status: done

Started: 2026-04-22 19:59:55
Settings
Chain sequence(s) H: VQLVESGGGLVQPGGSLRLSCAASGVSLPDYGVSWFRQAPGKGREWLGVIWGSETTYYNSRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAAHYYYGGSYAMDYWGQGTQVTVSSENLYFQGGGGSGGGGSVESGGGLVQPGGSLRLSCAASGDSVSSNSAAWNWFRQAPGKGREWLGRTYYRSKWYNDYAVSRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAAEVTGDLEDAFDIWGQGTQVTVSS
C: PLVVKVEEGDNAVLQCLTQQLTWSRESPLKPFLKLSLGLPGLGIHVSPLAIWLFISNVSQQMGGFYLCQPGPPSEKAWQPGWTVNVEGSGELFRWNVSDLGGLSPKLYVWAKDRPEIWEGEPPCLSQDLTMAPGSTLWLSCGVPPDSVSRGPLSWTHVHPKGPKSLLSLELKDDRPARDMWVMETGLLLPRATAQDAGKYYCHRGNLTMSFHLEITAR
U: LYAPRRLRVSMSPGDQVMEGKSATLTCESDANPPVSHYTWFDWNNQSLPYHSQKLRLEPVKVQHSGAYWCQGTNSVGKGRSPLSTLTVYYSPE
input PDB
Selected Chain(s) H,C,U
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:08)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:08)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:08)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:08)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:08)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:53)
Show buried residues

Minimal score value
-3.5116
Maximal score value
1.9321
Average score
-0.6476
Total score value
-362.026

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
23 P C 0.4573
24 L C 1.5195
25 V C 1.4398
26 V C 0.5043
27 K C -1.6337
28 V C 0.0000
29 E C -3.5116
30 E C -3.3068
31 G C -2.6849
32 D C -3.2632
33 N C -2.3769
34 A C 0.0000
35 V C 1.0108
36 L C 0.0000
37 Q C -0.0539
38 C C 0.0000
39 L C 1.1271
47 T C -1.0572
48 Q C -1.9546
49 Q C -1.9803
50 L C 0.0000
51 T C 0.0000
52 W C 0.0000
53 S C 0.0000
54 R C -2.0169
55 E C -2.6466
56 S C -1.3365
57 P C -0.6388
58 L C 0.2646
59 K C -1.8234
60 P C -1.5776
61 F C 0.0000
62 L C 0.0000
63 K C -1.2682
64 L C 0.0000
65 S C -1.1616
66 L C -0.6596
67 G C -0.4887
68 L C -0.2083
69 P C -0.6866
70 G C -0.8943
71 L C 0.0000
72 G C 0.0000
73 I C 0.0000
74 H C 0.0731
75 V C 0.0000
76 S C -0.0484
77 P C 0.0298
78 L C 0.9886
79 A C 0.0000
80 I C 0.0000
81 W C 0.5428
82 L C 0.0000
83 F C 0.3614
84 I C 0.0000
85 S C -0.9744
86 N C -1.7256
87 V C 0.0000
88 S C -1.6038
89 Q C -2.0112
90 Q C -1.8461
91 M C -0.9476
92 G C 0.0000
93 G C 0.0000
94 F C 0.0000
95 Y C 0.0000
96 L C 0.0000
97 C C 0.0000
98 Q C 0.0000
99 P C -0.6416
100 G C -1.0019
101 P C -1.2236
102 P C -1.2348
103 S C -1.6171
104 E C -2.7670
105 K C -2.7515
106 A C -1.5442
107 W C -1.1493
108 Q C -1.1265
109 P C -0.7948
110 G C 0.0000
111 W C -0.1995
112 T C 0.0000
113 V C 0.0000
114 N C 0.0000
115 V C 0.0000
116 E C -2.2856
117 G C -1.6405
118 S C -1.6645
119 G C -1.2824
120 E C -1.2359
121 L C -0.3060
122 F C 0.0000
123 R C 0.0000
124 W C 0.0000
125 N C -1.4562
126 V C -0.4000
127 S C -0.3957
128 D C -0.6909
129 L C 0.0000
130 G C 0.1808
131 G C 0.3824
132 L C 1.0559
153 S C -0.8423
154 P C -1.2057
155 K C -1.5196
156 L C 0.0000
157 Y C 0.0000
158 V C 0.0000
159 W C 0.0000
160 A C -1.6425
161 K C -2.6643
162 D C -2.4729
163 R C -1.7867
164 P C 0.0000
165 E C -1.1792
166 I C -0.5774
167 W C -1.1405
168 E C -2.3651
169 G C -2.2471
170 E C -2.2650
171 P C -0.8295
172 P C -0.1186
173 C C 0.6153
174 L C 1.4194
185 S C -0.5869
186 Q C -0.7141
187 D C -0.6985
188 L C 0.0651
189 T C -0.3128
190 M C -0.5107
191 A C -1.1184
192 P C -1.3848
193 G C -1.2027
194 S C -0.8119
195 T C -0.5074
196 L C 0.0000
197 W C 0.5780
198 L C 0.0000
199 S C 0.0000
200 C C 0.0000
201 G C -0.0758
202 V C 0.9927
203 P C 0.4064
204 P C -0.3716
205 D C -1.2796
206 S C -0.4330
207 V C -0.4753
208 S C -0.9901
209 R C -2.4776
210 G C -1.5938
211 P C -1.1797
212 L C 0.0000
213 S C 0.0000
214 W C 0.0000
215 T C -0.2187
216 H C 0.0000
217 V C 0.0000
218 H C 0.0000
219 P C 0.0000
220 K C -0.7278
221 G C 0.0000
222 P C 0.0000
223 K C -0.6978
224 S C -0.4037
225 L C 0.0000
226 L C 0.0000
227 S C -0.5883
228 L C 0.0000
229 E C -1.6761
230 L C 0.0000
231 K C -3.0828
232 D C -3.4078
233 D C -3.4272
234 R C -2.1886
235 P C -1.0595
236 A C -0.8261
237 R C -0.8395
238 D C -0.7311
239 M C 0.0000
240 W C 0.5062
241 V C 0.0000
242 M C -0.5857
243 E C -1.6847
244 T C 0.0000
245 G C 0.0000
246 L C 0.0000
247 L C 0.3810
248 L C 0.0000
249 P C -1.4528
250 R C -3.1637
251 A C 0.0000
252 T C -1.7573
253 A C -1.2323
254 Q C -1.3449
255 D C 0.0000
256 A C -1.0763
257 G C -1.3555
258 K C -1.6335
259 Y C 0.0000
260 Y C -0.6582
261 C C 0.0000
262 H C -0.7948
263 R C -1.4351
264 G C -1.5866
265 N C -1.3464
266 L C 0.2240
267 T C -0.1244
268 M C 0.3726
269 S C 0.0346
270 F C 0.0000
271 H C -0.2975
272 L C 0.0000
273 E C -1.6266
274 I C -1.7871
275 T C -1.5669
276 A C -1.4596
277 R C -2.6493
1 V H 0.3758
2 Q H -0.3521
3 L H 0.0000
4 V H 0.1568
5 E H 0.0000
6 S H -0.3807
7 G H -0.9926
8 G H -0.6896
9 G H -0.0471
10 L H 1.0996
11 V H 0.2588
12 Q H -0.9968
13 P H -1.5857
14 G H -1.2036
15 G H -1.0876
16 S H -1.0765
17 L H 0.0000
18 R H -1.8118
19 L H 0.0000
20 S H -0.3870
21 C H 0.0000
22 A H -0.3586
23 A H 0.0000
24 S H -0.4085
25 G H -0.4405
26 V H 0.0000
27 S H -0.6828
28 L H 0.0000
29 P H -1.2055
30 D H -1.2788
31 Y H -0.1573
32 G H 0.0000
33 V H 0.0000
34 S H 0.0000
35 W H 0.0000
36 F H -0.4376
37 R H -1.4434
38 Q H -2.2075
39 A H -2.0550
40 P H -1.3640
41 G H -1.7565
42 K H -2.9443
43 G H -2.7448
44 R H -3.0755
45 E H -2.2923
46 W H -0.5422
47 L H 0.0000
48 G H 0.0000
49 V H 0.0000
50 I H 0.0000
51 W H 0.0000
52 G H 0.0000
53 S H -1.0527
54 E H -1.3366
55 T H -0.5057
56 T H 0.3528
57 Y H 1.2054
58 Y H 0.6851
59 N H -0.8891
60 S H -1.1178
61 R H -1.4386
62 F H 0.0000
63 T H -0.3336
64 I H 0.0000
65 S H -0.3848
66 R H -0.9656
67 D H -1.4651
68 N H -1.6405
69 A H -1.3271
70 K H -2.2484
71 R H -1.8805
72 M H -0.9407
73 V H 0.0000
74 Y H -0.3717
75 L H 0.0000
76 Q H -1.0963
77 M H 0.0000
78 N H -1.5114
79 S H -1.2807
80 L H 0.0000
81 R H -2.5071
82 A H -1.7969
83 E H -2.3653
84 D H 0.0000
85 T H -0.9665
86 A H 0.0000
87 V H -0.8243
88 Y H 0.0000
89 Y H -0.2255
90 C H 0.0000
91 A H 0.0000
92 A H 0.0000
93 H H 0.0000
94 Y H 0.7754
95 Y H 0.3627
96 Y H 0.2232
97 G H -0.3698
98 G H -0.5021
99 S H -0.1572
100 Y H 0.3143
101 A H 0.1701
102 M H 0.0019
103 D H -0.8334
104 Y H 0.0804
105 W H 0.0515
106 G H -0.1346
107 Q H -1.0757
108 G H 0.0000
109 T H -0.8822
110 Q H -1.2175
111 V H 0.0000
112 T H -0.1556
113 V H 0.0000
114 S H -0.8506
115 S H -0.3533
116 E H -0.5086
117 N H -0.7263
118 L H 1.2265
119 Y H 1.9321
120 F H 1.4667
121 Q H 0.0785
122 G H -0.4518
123 G H -0.3123
124 G H -0.7916
125 G H -0.6785
126 S H -0.5624
127 G H -1.1528
128 G H -1.2504
129 G H -0.7926
130 G H -0.3336
131 S H 0.4798
132 V H 1.2915
133 E H 0.0000
134 S H -0.3087
135 G H -1.1200
136 G H -0.6033
137 G H -0.2283
138 L H 0.9153
139 V H -0.3616
140 Q H -1.3814
141 P H -1.5579
142 G H -1.4956
143 G H -1.2303
144 S H -1.4488
145 L H 0.0000
146 R H -2.1796
147 L H 0.0000
148 S H -0.1251
149 C H 0.0000
150 A H 0.2222
151 A H 0.0000
152 S H -0.8829
153 G H -1.4287
154 D H -1.6492
155 S H -1.5857
156 V H 0.0000
157 S H -1.1552
158 S H -0.8613
159 N H -1.3136
160 S H -1.2438
161 A H -0.3477
162 A H 0.0000
163 W H 0.0000
164 N H 0.0000
165 W H 0.0000
166 F H 0.0575
167 R H 0.0000
168 Q H -1.5917
169 A H -1.7421
170 P H -1.3531
171 G H -1.8978
172 K H -2.7772
173 G H -2.1103
174 R H -1.9666
175 E H -1.1277
176 W H -0.0088
177 L H 0.0000
178 G H 0.0000
179 R H -0.1599
180 T H 0.0000
181 Y H 0.0000
182 Y H -0.7818
183 R H -1.9279
184 S H 0.0000
185 K H -0.7621
186 W H -0.3982
187 Y H 0.0445
188 N H -0.1727
189 D H -0.8748
190 Y H 0.6676
191 A H 0.0000
192 V H 0.7542
193 S H 0.1015
194 R H -0.0832
195 F H 0.0000
196 T H -0.3215
197 I H 0.0000
198 S H -0.4814
199 R H -1.1440
200 D H -1.6440
201 N H -2.1239
202 A H -1.7154
203 K H -2.4494
204 R H -2.1233
205 M H -0.8015
206 V H 0.0000
207 Y H -0.1590
208 L H 0.0000
209 Q H -1.1751
210 M H 0.0000
211 N H -1.3917
212 S H -1.2455
213 L H 0.0000
214 R H -2.7859
215 A H -1.8783
216 E H -2.4166
217 D H 0.0000
218 T H -0.9644
219 A H -1.0792
220 V H -0.7335
221 Y H 0.0000
222 Y H -0.2084
223 C H 0.0000
224 A H 0.0000
225 A H 0.6934
226 E H 0.0000
227 V H -0.0359
228 T H -1.0009
229 G H -1.8265
230 D H -2.1160
231 L H -0.6707
232 E H -1.9538
233 D H -1.5781
234 A H -0.2573
235 F H 0.5433
236 D H 0.0368
237 I H 1.5602
238 W H 0.9172
239 G H 0.0000
240 Q H -0.8234
241 G H -0.7989
242 T H -0.9623
243 Q H -1.2256
244 V H 0.0000
245 T H -0.4080
246 V H 0.0000
247 S H -0.6611
248 S H -0.5793
590 L U 1.6041
591 Y U 0.7296
592 A U -0.1058
593 P U 0.0000
594 R U -3.1104
595 R U -3.2870
596 L U 0.0000
597 R U -2.4768
598 V U 0.0000
599 S U -1.0373
600 M U -1.1178
601 S U -0.8604
602 P U -0.9172
603 G U -1.2431
604 D U -1.9123
605 Q U -1.6694
606 V U 0.0000
607 M U -0.0873
608 E U -0.6919
609 G U -1.0970
610 K U -2.1970
611 S U -1.5764
612 A U 0.0000
613 T U -1.4987
614 L U 0.0000
615 T U -1.5692
616 C U 0.0000
617 E U -2.1787
618 S U -2.0215
619 D U -1.6817
620 A U -0.9046
621 N U -0.2871
622 P U -0.0975
623 P U -0.4731
624 V U -0.6760
625 S U -0.5118
626 H U -0.8337
627 Y U -1.2247
628 T U 0.0000
629 W U 0.0000
630 F U -0.2659
631 D U 0.0000
632 W U 0.2281
633 N U -1.5085
634 N U -1.7466
635 Q U -1.6008
636 S U -1.2310
637 L U -0.6891
638 P U 0.0000
639 Y U 0.0000
640 H U -1.8542
641 S U -1.4530
642 Q U -1.8629
643 K U -2.5805
644 L U 0.0000
645 R U -2.0980
646 L U 0.0000
647 E U -1.6760
648 P U -1.3577
649 V U 0.0000
650 K U -1.3291
651 V U -0.1702
652 Q U -1.5638
653 H U -1.0689
654 S U -0.7671
655 G U -0.0479
656 A U 0.3580
657 Y U 0.0000
658 W U 0.0000
659 C U 0.0000
660 Q U -1.5567
661 G U 0.0000
662 T U -1.0049
663 N U -0.2202
664 S U 0.3128
665 V U 1.3100
666 G U -0.2344
667 K U -2.0234
668 G U -2.1858
669 R U -2.6132
670 S U 0.0000
671 P U -0.5994
672 L U 0.8526
673 S U 0.1231
674 T U -0.1538
675 L U 0.0000
676 T U -0.8521
677 V U 0.0000
678 Y U 1.0707
679 Y U 1.2657
680 S U 0.0306
681 P U -0.6901
682 E U -1.7687
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Laboratory of Theory of Biopolymers 2018