Project name: query_structure

Status: done

Started: 2026-03-16 23:46:36
Settings
Chain sequence(s) A: CPKILKKCRRDSDCPGACICRGNGYCGSGSDGGV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:10)
Show buried residues

Minimal score value
-4.0115
Maximal score value
1.8105
Average score
-0.757
Total score value
-25.7376

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.9375
2 P A 0.4350
3 K A -0.0249
4 I A 1.8105
5 L A 1.4067
6 K A -0.7597
7 K A -2.7671
8 C A 0.0000
9 R A -3.9117
10 R A -4.0115
11 D A -3.1749
12 S A -2.2382
13 D A -2.7890
14 C A -1.4718
15 P A -0.6613
16 G A -0.6299
17 A A -0.0137
18 C A 0.5024
19 I A 0.2996
20 C A -1.6712
21 R A -1.5680
22 G A -1.6548
23 N A -2.0355
24 G A 0.0000
25 Y A -1.2669
26 C A 0.0000
27 G A 0.0000
28 S A 0.3762
29 G A -0.4589
30 S A -0.4610
31 D A -0.5998
32 G A -0.5534
33 G A 0.0137
34 V A 1.2040
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Laboratory of Theory of Biopolymers 2018