| Chain sequence(s) |
A: CPKILKKCRRDSDCPGACICRGNGYCGSGSDGGV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.9375 | |
| 2 | P | A | 0.4350 | |
| 3 | K | A | -0.0249 | |
| 4 | I | A | 1.8105 | |
| 5 | L | A | 1.4067 | |
| 6 | K | A | -0.7597 | |
| 7 | K | A | -2.7671 | |
| 8 | C | A | 0.0000 | |
| 9 | R | A | -3.9117 | |
| 10 | R | A | -4.0115 | |
| 11 | D | A | -3.1749 | |
| 12 | S | A | -2.2382 | |
| 13 | D | A | -2.7890 | |
| 14 | C | A | -1.4718 | |
| 15 | P | A | -0.6613 | |
| 16 | G | A | -0.6299 | |
| 17 | A | A | -0.0137 | |
| 18 | C | A | 0.5024 | |
| 19 | I | A | 0.2996 | |
| 20 | C | A | -1.6712 | |
| 21 | R | A | -1.5680 | |
| 22 | G | A | -1.6548 | |
| 23 | N | A | -2.0355 | |
| 24 | G | A | 0.0000 | |
| 25 | Y | A | -1.2669 | |
| 26 | C | A | 0.0000 | |
| 27 | G | A | 0.0000 | |
| 28 | S | A | 0.3762 | |
| 29 | G | A | -0.4589 | |
| 30 | S | A | -0.4610 | |
| 31 | D | A | -0.5998 | |
| 32 | G | A | -0.5534 | |
| 33 | G | A | 0.0137 | |
| 34 | V | A | 1.2040 |