Project name: 10.P2D11-2.pdb

Status: done

Started: 2026-03-19 12:32:22
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Chain sequence(s) H: QVQLVESGGGLVQAGGSLKLSCVASGNIFRSLHMGWYRQAPGKQRELVAIITDTSSTGYTDSVKGRFTISRDNTKNTMYLQMNNLKPEDTAVYYCNARLANIYWGRGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:16)
Show buried residues

Minimal score value
-2.658
Maximal score value
1.1728
Average score
-0.7189
Total score value
-81.9505

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.6223
2 V H -1.0416
3 Q H -0.8756
4 L H 0.0000
5 V H 0.7535
6 E H -0.0064
7 S H -0.5521
8 G H -1.1322
9 G H -0.6399
11 G H 0.3100
12 L H 1.1728
13 V H 0.1114
14 Q H -1.3303
15 A H -1.7863
16 G H -1.7845
17 G H -1.1857
18 S H -1.4243
19 L H -0.9574
20 K H -1.9039
21 L H 0.0000
22 S H -0.1481
23 C H 0.0000
24 V H 0.6363
25 A H 0.0000
26 S H -0.9131
27 G H -1.5168
28 N H -1.7985
29 I H -1.4391
30 F H 0.0000
35 R H -2.3862
36 S H -0.9448
37 L H -0.4540
38 H H -0.6366
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 Y H 0.2551
43 R H 0.0000
44 Q H -1.2078
45 A H -1.2801
46 P H -1.0371
47 G H -1.4336
48 K H -2.1438
49 Q H -2.2250
50 R H -1.5486
51 E H -0.8035
52 L H 0.3912
53 V H 0.0000
54 A H 0.0000
55 I H 0.5956
56 I H 0.0000
57 T H -0.7666
58 D H -1.5198
59 T H -0.7274
63 S H -0.7524
64 S H -0.4229
65 T H -0.1067
66 G H -0.2587
67 Y H -0.6072
68 T H -1.1310
69 D H -2.5346
70 S H -1.7639
71 V H 0.0000
72 K H -2.6580
74 G H -1.8972
75 R H -1.8570
76 F H 0.0000
77 T H -0.7515
78 I H 0.0000
79 S H -0.2411
80 R H -1.1796
81 D H -1.7353
82 N H -2.5559
83 T H -1.6787
84 K H -2.2383
85 N H -1.9045
86 T H 0.0000
87 M H 0.0000
88 Y H -0.2116
89 L H 0.0000
90 Q H -1.1269
91 M H 0.0000
92 N H -1.8920
93 N H -2.2981
94 L H 0.0000
95 K H -2.4040
96 P H -1.7838
97 E H -2.2556
98 D H 0.0000
99 T H -0.7491
100 A H 0.0000
101 V H -0.2918
102 Y H 0.0000
103 Y H -0.1282
104 C H 0.0000
105 N H 0.0000
106 A H 0.0000
107 R H -0.7459
108 L H -0.2990
114 A H -0.2594
115 N H -0.6439
116 I H 0.8520
117 Y H 0.6075
118 W H 0.5215
119 G H -0.2901
120 R H -1.5716
121 G H -0.7946
122 T H -0.7164
123 Q H -0.5289
124 V H 0.0000
125 T H -0.1164
126 V H 0.0000
127 S H -0.7738
128 S H -0.8288
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Laboratory of Theory of Biopolymers 2018