| Chain sequence(s) |
H: EVQLQQSGPEVEKTGASVKISCKASGYSFTAYYIQWLKQSHGKSLEWIGYINCYNGGTGYNPKFRGKATFSVDSSSNTAYMHFNSLTSDDSAVYFCARSDYDTMDYWGQGTSVTVSS
L: DVLMTQTPLSLPVSLGGQASISCRSTQTILHSNGKTYLEWYFLRPGQSPKLLIYQVSNRFSGVPDRFSGSGSGTDFTLKISRVESEDLGLYYCFQGSHFPYTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:26)
[INFO] Main: Simulation completed successfully. (00:03:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1641 | |
| 2 | V | H | -1.3412 | |
| 3 | Q | H | -2.1677 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.2511 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -1.1984 | |
| 8 | G | H | -1.0141 | |
| 9 | P | H | -0.3924 | |
| 10 | E | H | -0.3219 | |
| 11 | V | H | 0.7599 | |
| 12 | E | H | -0.8286 | |
| 13 | K | H | -1.9317 | |
| 14 | T | H | -1.6887 | |
| 15 | G | H | -1.2887 | |
| 16 | A | H | -0.9401 | |
| 17 | S | H | -1.2754 | |
| 18 | V | H | 0.0000 | |
| 19 | K | H | -1.8854 | |
| 20 | I | H | 0.0000 | |
| 21 | S | H | -0.8665 | |
| 22 | C | H | 0.0000 | |
| 23 | K | H | -2.1133 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -1.5763 | |
| 26 | G | H | -1.3479 | |
| 27 | Y | H | -0.6269 | |
| 28 | S | H | -0.2331 | |
| 29 | F | H | 0.0000 | |
| 30 | T | H | 0.1908 | |
| 31 | A | H | 0.3324 | |
| 32 | Y | H | 0.4855 | |
| 33 | Y | H | 0.2976 | |
| 34 | I | H | 0.0000 | |
| 35 | Q | H | -0.0346 | |
| 36 | W | H | 0.0000 | |
| 37 | L | H | 0.0000 | |
| 38 | K | H | 0.0000 | |
| 39 | Q | H | -0.8279 | |
| 40 | S | H | -1.3313 | |
| 41 | H | H | -1.5796 | |
| 42 | G | H | -1.4705 | |
| 43 | K | H | -1.9659 | |
| 44 | S | H | -1.3395 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -0.7764 | |
| 47 | W | H | 0.0000 | |
| 48 | I | H | 0.0000 | |
| 49 | G | H | 0.0000 | |
| 50 | Y | H | 0.1910 | |
| 51 | I | H | 0.0000 | |
| 52 | N | H | -0.1502 | |
| 53 | C | H | 0.0000 | |
| 54 | Y | H | 0.5615 | |
| 55 | N | H | -0.8189 | |
| 56 | G | H | -0.6361 | |
| 57 | G | H | -0.5040 | |
| 58 | T | H | -0.3502 | |
| 59 | G | H | -0.1082 | |
| 60 | Y | H | 0.0000 | |
| 61 | N | H | 0.0000 | |
| 62 | P | H | -1.6434 | |
| 63 | K | H | -2.5273 | |
| 64 | F | H | 0.0000 | |
| 65 | R | H | -2.7718 | |
| 66 | G | H | -1.8795 | |
| 67 | K | H | -1.6320 | |
| 68 | A | H | 0.0000 | |
| 69 | T | H | -0.8011 | |
| 70 | F | H | 0.0000 | |
| 71 | S | H | -0.0935 | |
| 72 | V | H | -0.2836 | |
| 73 | D | H | -0.8799 | |
| 74 | S | H | -0.7253 | |
| 75 | S | H | -0.6719 | |
| 76 | S | H | -0.8979 | |
| 77 | N | H | -1.1469 | |
| 78 | T | H | 0.0000 | |
| 79 | A | H | 0.0000 | |
| 80 | Y | H | -0.2973 | |
| 81 | M | H | 0.0000 | |
| 82 | H | H | -1.0986 | |
| 83 | F | H | 0.0000 | |
| 84 | N | H | -1.1438 | |
| 85 | S | H | -0.9762 | |
| 86 | L | H | 0.0000 | |
| 87 | T | H | -1.4220 | |
| 88 | S | H | -1.5543 | |
| 89 | D | H | -1.9502 | |
| 90 | D | H | 0.0000 | |
| 91 | S | H | -0.7489 | |
| 92 | A | H | -0.5258 | |
| 93 | V | H | -0.1048 | |
| 94 | Y | H | 0.0000 | |
| 95 | F | H | 0.0000 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | R | H | 0.0000 | |
| 99 | S | H | 0.0000 | |
| 100 | D | H | -0.3972 | |
| 101 | Y | H | 0.4720 | |
| 102 | D | H | -0.7880 | |
| 103 | T | H | 0.0000 | |
| 104 | M | H | 0.0000 | |
| 105 | D | H | 0.0000 | |
| 106 | Y | H | -0.0189 | |
| 107 | W | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | Q | H | -1.6571 | |
| 110 | G | H | -0.9086 | |
| 111 | T | H | 0.0000 | |
| 112 | S | H | -0.1373 | |
| 113 | V | H | 0.0000 | |
| 114 | T | H | -0.2518 | |
| 115 | V | H | 0.0000 | |
| 116 | S | H | -0.8467 | |
| 117 | S | H | -1.0260 | |
| 1 | D | L | -1.0578 | |
| 2 | V | L | 0.0299 | |
| 3 | L | L | 0.6049 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.3780 | |
| 6 | Q | L | 0.0000 | |
| 7 | T | L | -0.0675 | |
| 8 | P | L | 0.4221 | |
| 9 | L | L | 1.1957 | |
| 10 | S | L | 0.2707 | |
| 11 | L | L | 0.0127 | |
| 12 | P | L | -0.5154 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -0.5284 | |
| 15 | L | L | -0.2916 | |
| 16 | G | L | -1.1601 | |
| 17 | G | L | -1.3683 | |
| 18 | Q | L | -2.3010 | |
| 19 | A | L | 0.0000 | |
| 20 | S | L | -1.1182 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.9191 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.2991 | |
| 25 | S | L | 0.0000 | |
| 26 | T | L | -0.8987 | |
| 27 | Q | L | -1.4125 | |
| 28 | T | L | -0.7529 | |
| 29 | I | L | 0.0000 | |
| 30 | L | L | 0.0189 | |
| 31 | H | L | -0.8557 | |
| 32 | S | L | -1.1302 | |
| 33 | N | L | -1.8886 | |
| 34 | G | L | -1.5421 | |
| 35 | K | L | -1.7524 | |
| 36 | T | L | -0.6443 | |
| 37 | Y | L | -0.1658 | |
| 38 | L | L | 0.0000 | |
| 39 | E | L | 0.0000 | |
| 40 | W | L | 0.0000 | |
| 41 | Y | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | L | L | 0.0000 | |
| 44 | R | L | -1.7029 | |
| 45 | P | L | -1.3397 | |
| 46 | G | L | -1.5406 | |
| 47 | Q | L | -2.1515 | |
| 48 | S | L | -1.6189 | |
| 49 | P | L | 0.0000 | |
| 50 | K | L | -1.2425 | |
| 51 | L | L | 0.0000 | |
| 52 | L | L | 0.0000 | |
| 53 | I | L | 0.0000 | |
| 54 | Y | L | -0.2406 | |
| 55 | Q | L | -0.5663 | |
| 56 | V | L | -0.4688 | |
| 57 | S | L | -0.7476 | |
| 58 | N | L | -1.0415 | |
| 59 | R | L | -1.6153 | |
| 60 | F | L | -0.6403 | |
| 61 | S | L | -0.6151 | |
| 62 | G | L | -0.8991 | |
| 63 | V | L | 0.0000 | |
| 64 | P | L | -1.3580 | |
| 65 | D | L | -2.2748 | |
| 66 | R | L | -2.3806 | |
| 67 | F | L | 0.0000 | |
| 68 | S | L | -1.6001 | |
| 69 | G | L | 0.0000 | |
| 70 | S | L | -0.9574 | |
| 71 | G | L | -1.0676 | |
| 72 | S | L | -0.8000 | |
| 73 | G | L | -0.7790 | |
| 74 | T | L | -1.4712 | |
| 75 | D | L | -2.1143 | |
| 76 | F | L | 0.0000 | |
| 77 | T | L | -1.1732 | |
| 78 | L | L | 0.0000 | |
| 79 | K | L | -2.3507 | |
| 80 | I | L | 0.0000 | |
| 81 | S | L | -2.4303 | |
| 82 | R | L | -2.7023 | |
| 83 | V | L | 0.0000 | |
| 84 | E | L | -2.1075 | |
| 85 | S | L | -1.1787 | |
| 86 | E | L | -2.1719 | |
| 87 | D | L | 0.0000 | |
| 88 | L | L | -0.6282 | |
| 89 | G | L | -0.6813 | |
| 90 | L | L | -0.5686 | |
| 91 | Y | L | 0.0000 | |
| 92 | Y | L | 0.0000 | |
| 93 | C | L | 0.0000 | |
| 94 | F | L | 0.0000 | |
| 95 | Q | L | 0.0000 | |
| 96 | G | L | 0.3641 | |
| 97 | S | L | 0.0000 | |
| 98 | H | L | 0.4200 | |
| 99 | F | L | 1.5231 | |
| 100 | P | L | 0.5155 | |
| 101 | Y | L | 0.6848 | |
| 102 | T | L | 0.2447 | |
| 103 | F | L | 0.0000 | |
| 104 | G | L | 0.0000 | |
| 105 | G | L | -0.3010 | |
| 106 | G | L | 0.0000 | |
| 107 | T | L | 0.0000 | |
| 108 | K | L | -0.4879 | |
| 109 | L | L | 0.0000 | |
| 110 | E | L | -0.3753 | |
| 111 | I | L | 0.3085 | |
| 112 | K | L | -1.1240 |