| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | TY117C,WN110C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 1.81824 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:22)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:27)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46)
[INFO] Main: Simulation completed successfully. (00:00:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.0060 | |
| 2 | V | C | -1.1687 | |
| 3 | Q | C | -1.5805 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.3160 | |
| 6 | E | C | -0.0150 | |
| 7 | S | C | -0.4606 | |
| 8 | G | C | -0.8755 | |
| 9 | G | C | 0.0148 | |
| 10 | G | C | 1.0210 | |
| 11 | L | C | 1.6652 | |
| 12 | V | C | 0.1571 | |
| 13 | Q | C | -1.2247 | |
| 14 | P | C | -1.4103 | |
| 15 | G | C | -1.4134 | |
| 16 | G | C | -0.9785 | |
| 17 | S | C | -1.2309 | |
| 18 | L | C | -0.9631 | |
| 19 | R | C | -2.1462 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.5418 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.1957 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -0.2017 | |
| 26 | D | C | 0.0000 | |
| 27 | F | C | 1.5458 | |
| 28 | T | C | 0.2525 | |
| 29 | F | C | 0.0000 | |
| 30 | R | C | -2.0325 | |
| 31 | S | C | -0.8863 | |
| 32 | Y | C | -1.2160 | |
| 33 | E | C | -1.0755 | |
| 34 | M | C | 0.0000 | |
| 35 | S | C | 0.0000 | |
| 36 | W | C | 0.0000 | |
| 37 | V | C | 0.0000 | |
| 38 | R | C | 0.0000 | |
| 39 | Q | C | -0.3597 | |
| 40 | A | C | -0.9506 | |
| 41 | P | C | -1.3084 | |
| 42 | G | C | -1.4330 | |
| 43 | K | C | -2.1226 | |
| 44 | G | C | -1.0118 | |
| 45 | L | C | 0.5152 | |
| 46 | E | C | -0.3411 | |
| 47 | W | C | 0.3640 | |
| 48 | V | C | 0.0000 | |
| 49 | S | C | 0.0000 | |
| 50 | A | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | S | C | -0.5831 | |
| 53 | G | C | -1.2447 | |
| 54 | S | C | -1.2286 | |
| 55 | G | C | -1.0817 | |
| 56 | G | C | -0.7345 | |
| 57 | S | C | -0.3025 | |
| 58 | T | C | 0.1989 | |
| 59 | Y | C | 0.6077 | |
| 60 | Y | C | -0.3562 | |
| 61 | A | C | -1.1390 | |
| 62 | D | C | -2.3443 | |
| 63 | S | C | -1.7150 | |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -2.3847 | |
| 66 | G | C | -1.6175 | |
| 67 | R | C | 0.0000 | |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.6722 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.5624 | |
| 72 | R | C | -1.3626 | |
| 73 | D | C | -1.9805 | |
| 74 | N | C | -2.1901 | |
| 75 | S | C | -1.7905 | |
| 76 | K | C | -2.3163 | |
| 77 | N | C | -1.6491 | |
| 78 | T | C | 0.0000 | |
| 79 | L | C | 0.0000 | |
| 80 | Y | C | -0.6696 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.2337 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | -1.3327 | |
| 85 | S | C | -1.2322 | |
| 86 | L | C | 0.0000 | |
| 87 | R | C | -2.3833 | |
| 88 | A | C | -1.7442 | |
| 89 | E | C | -2.2475 | |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -0.1878 | |
| 92 | A | C | 0.0000 | |
| 93 | I | C | 1.0247 | |
| 94 | Y | C | 0.0000 | |
| 95 | Y | C | 0.1821 | |
| 96 | C | C | 0.0000 | |
| 97 | A | C | 0.0000 | |
| 98 | R | C | 0.0000 | |
| 99 | L | C | 0.0000 | |
| 100 | R | C | -2.9681 | |
| 101 | D | C | -3.2341 | |
| 102 | G | C | -2.0117 | |
| 103 | F | C | -1.1502 | |
| 104 | N | C | -2.3472 | |
| 105 | K | C | -3.0485 | |
| 106 | G | C | -1.5981 | |
| 107 | F | C | -0.7327 | |
| 108 | D | C | -1.2368 | |
| 109 | Y | C | -0.9783 | |
| 110 | N | C | -1.2902 | mutated: WN110C |
| 111 | G | C | 0.0000 | |
| 112 | Q | C | -1.3154 | |
| 113 | G | C | -0.2892 | |
| 114 | T | C | 0.3947 | |
| 115 | L | C | 1.5273 | |
| 116 | V | C | 0.0000 | |
| 117 | Y | C | 1.0131 | mutated: TY117C |
| 118 | V | C | 0.0000 | |
| 119 | S | C | -0.5973 | |
| 120 | S | C | -0.9809 |