| Chain sequence(s) |
A: SEEEKKKLLERIKEYVEKNGPPEGVDKEEYIKKLFEELLKQLEKVNRIEKRGGPKPVG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:45)
[INFO] Main: Simulation completed successfully. (00:01:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -2.7166 | |
| 2 | E | A | -3.9630 | |
| 3 | E | A | -4.2497 | |
| 4 | E | A | -3.6167 | |
| 5 | K | A | -3.9525 | |
| 6 | K | A | -4.6371 | |
| 7 | K | A | -4.1905 | |
| 8 | L | A | -3.0033 | |
| 9 | L | A | -3.1269 | |
| 10 | E | A | -4.1846 | |
| 11 | R | A | -4.1031 | |
| 12 | I | A | 0.0000 | |
| 13 | K | A | -4.1451 | |
| 14 | E | A | -4.3086 | |
| 15 | Y | A | -2.7185 | |
| 16 | V | A | 0.0000 | |
| 17 | E | A | -4.0932 | |
| 18 | K | A | -3.6188 | |
| 19 | N | A | -2.7622 | |
| 20 | G | A | -2.5920 | |
| 21 | P | A | -2.2612 | |
| 22 | P | A | -1.5168 | |
| 23 | E | A | -2.2699 | |
| 24 | G | A | -1.5591 | |
| 25 | V | A | -1.7189 | |
| 26 | D | A | -3.2729 | |
| 27 | K | A | -3.9326 | |
| 28 | E | A | -4.1024 | |
| 29 | E | A | -3.8952 | |
| 30 | Y | A | -2.9635 | |
| 31 | I | A | 0.0000 | |
| 32 | K | A | -3.7808 | |
| 33 | K | A | -3.5074 | |
| 34 | L | A | -2.1507 | |
| 35 | F | A | -2.5956 | |
| 36 | E | A | -3.0274 | |
| 37 | E | A | -3.2140 | |
| 38 | L | A | -2.0476 | |
| 39 | L | A | -2.3095 | |
| 40 | K | A | -3.3786 | |
| 41 | Q | A | -2.9348 | |
| 42 | L | A | -2.0931 | |
| 43 | E | A | -3.2721 | |
| 44 | K | A | -3.1154 | |
| 45 | V | A | -1.8771 | |
| 46 | N | A | -2.8875 | |
| 47 | R | A | -3.5438 | |
| 48 | I | A | -1.9484 | |
| 49 | E | A | -3.6322 | |
| 50 | K | A | -3.7118 | |
| 51 | R | A | -3.5340 | |
| 52 | G | A | -2.8495 | |
| 53 | G | A | -2.3297 | |
| 54 | P | A | -1.3704 | |
| 55 | K | A | -1.6536 | |
| 56 | P | A | -0.4227 | |
| 57 | V | A | 0.9340 | |
| 58 | G | A | 0.1026 |