| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGSSFSNYAWVRQAPGKGLEWVSISYDGSRTRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARARGGYYDYGSGFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32)
[INFO] Main: Simulation completed successfully. (00:01:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.2785 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.4351 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.2122 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.1599 | |
| 8 | G | A | -0.6534 | |
| 9 | G | A | 0.1032 | |
| 10 | G | A | 0.6557 | |
| 11 | L | A | 1.3291 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.3806 | |
| 14 | P | A | -1.6346 | |
| 15 | G | A | -1.3903 | |
| 16 | G | A | -0.9536 | |
| 17 | S | A | -1.2706 | |
| 18 | L | A | -1.0679 | |
| 19 | R | A | -2.1209 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4294 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.0774 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.2156 | |
| 26 | G | A | -1.5388 | |
| 27 | S | A | -1.0265 | |
| 28 | S | A | -0.6530 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.4178 | |
| 31 | N | A | -0.3626 | |
| 32 | Y | A | 0.0000 | |
| 33 | A | A | 0.0000 | |
| 34 | W | A | 0.0000 | |
| 35 | V | A | 0.0000 | |
| 36 | R | A | -0.1923 | |
| 37 | Q | A | -0.6832 | |
| 38 | A | A | -1.1899 | |
| 39 | P | A | -1.2381 | |
| 40 | G | A | -1.4630 | |
| 41 | K | A | -2.2356 | |
| 42 | G | A | -1.1090 | |
| 43 | L | A | 0.1486 | |
| 44 | E | A | -0.5455 | |
| 45 | W | A | 0.4038 | |
| 46 | V | A | 0.0000 | |
| 47 | S | A | -0.2906 | |
| 48 | I | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | Y | A | 0.1978 | |
| 51 | D | A | -1.6539 | |
| 52 | G | A | -1.0763 | |
| 53 | S | A | -1.4373 | |
| 54 | R | A | -1.9445 | |
| 55 | T | A | -1.1209 | |
| 56 | R | A | -1.2176 | |
| 57 | F | A | 0.0000 | |
| 58 | T | A | -1.2657 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -1.2959 | |
| 61 | R | A | -2.1993 | |
| 62 | D | A | -2.3345 | |
| 63 | N | A | -2.6442 | |
| 64 | S | A | -2.0675 | |
| 65 | K | A | -2.6916 | |
| 66 | N | A | -2.1821 | |
| 67 | T | A | 0.0000 | |
| 68 | L | A | 0.0000 | |
| 69 | Y | A | -0.8653 | |
| 70 | L | A | 0.0000 | |
| 71 | Q | A | -1.2629 | |
| 72 | M | A | 0.0000 | |
| 73 | N | A | -1.3532 | |
| 74 | S | A | -1.1831 | |
| 75 | L | A | 0.0000 | |
| 76 | R | A | -2.3505 | |
| 77 | A | A | -1.7962 | |
| 78 | E | A | -2.2813 | |
| 79 | D | A | 0.0000 | |
| 80 | T | A | -0.4883 | |
| 81 | A | A | 0.0000 | |
| 82 | V | A | 0.7501 | |
| 83 | Y | A | 0.0000 | |
| 84 | Y | A | 0.5335 | |
| 85 | C | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | R | A | -0.7171 | |
| 88 | A | A | 0.0000 | |
| 89 | R | A | -2.4419 | |
| 90 | G | A | -1.5900 | |
| 91 | G | A | -0.5049 | |
| 92 | Y | A | 1.0218 | |
| 93 | Y | A | 0.8617 | |
| 94 | D | A | -1.4759 | |
| 95 | Y | A | -0.7638 | |
| 96 | G | A | -1.1483 | |
| 97 | S | A | -1.4271 | |
| 98 | G | A | -1.1519 | |
| 99 | F | A | -0.5382 | |
| 100 | D | A | -0.7550 | |
| 101 | Y | A | -0.3412 | |
| 102 | W | A | 0.3342 | |
| 103 | G | A | -0.0145 | |
| 104 | Q | A | -0.6180 | |
| 105 | G | A | 0.0000 | |
| 106 | T | A | 0.6335 | |
| 107 | L | A | 1.5548 | |
| 108 | V | A | 0.0000 | |
| 109 | T | A | 0.3169 | |
| 110 | V | A | 0.0000 | |
| 111 | S | A | -0.5009 | |
| 112 | S | A | -0.8935 |