| Chain sequence(s) |
A: QQKFQFQFEQQ
C: QQKFQFQFEQQ B: QQKFQFQFEQQ E: QQKFQFQFEQQ D: QQKFQFQFEQQ G: QQKFQFQFEQQ F: QQKFQFQFEQQ H: QQKFQFQFEQQ input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:20)
[INFO] Main: Simulation completed successfully. (00:06:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -2.8155 | |
| 2 | Q | A | -2.5616 | |
| 3 | K | A | -2.1130 | |
| 4 | F | A | 0.0000 | |
| 5 | Q | A | -0.6132 | |
| 6 | F | A | 0.0000 | |
| 7 | Q | A | -0.8030 | |
| 8 | F | A | 0.0000 | |
| 9 | E | A | -2.3514 | |
| 10 | Q | A | -2.7477 | |
| 11 | Q | A | -2.9600 | |
| 1 | Q | B | -3.2016 | |
| 2 | Q | B | 0.0000 | |
| 3 | K | B | -2.5678 | |
| 4 | F | B | 0.0000 | |
| 5 | Q | B | -0.7077 | |
| 6 | F | B | 0.3473 | |
| 7 | Q | B | -0.3080 | |
| 8 | F | B | -0.5037 | |
| 9 | E | B | -2.2022 | |
| 10 | Q | B | -2.6098 | |
| 11 | Q | B | -2.9700 | |
| 1 | Q | C | -2.8303 | |
| 2 | Q | C | -2.4621 | |
| 3 | K | C | -2.2298 | |
| 4 | F | C | 0.6323 | |
| 5 | Q | C | -0.0715 | |
| 6 | F | C | 1.3925 | |
| 7 | Q | C | -0.6972 | |
| 8 | F | C | -0.5614 | |
| 9 | E | C | -3.0679 | |
| 10 | Q | C | -2.9581 | |
| 11 | Q | C | -2.8981 | |
| 1 | Q | D | -3.1037 | |
| 2 | Q | D | -3.1285 | |
| 3 | K | D | -3.5000 | |
| 4 | F | D | -1.5623 | |
| 5 | Q | D | -1.8739 | |
| 6 | F | D | -0.5272 | |
| 7 | Q | D | -1.5837 | |
| 8 | F | D | -0.6483 | |
| 9 | E | D | -3.2251 | |
| 10 | Q | D | -2.6187 | |
| 11 | Q | D | -3.2136 | |
| 1 | Q | E | -3.4704 | |
| 2 | Q | E | 0.0000 | |
| 3 | K | E | -3.0290 | |
| 4 | F | E | -0.6308 | |
| 5 | Q | E | -1.5841 | |
| 6 | F | E | 0.0000 | |
| 7 | Q | E | -2.1528 | |
| 8 | F | E | 0.0000 | |
| 9 | E | E | -3.8610 | |
| 10 | Q | E | -3.5780 | |
| 11 | Q | E | -3.5992 | |
| 1 | Q | F | -3.3840 | |
| 2 | Q | F | -3.1990 | |
| 3 | K | F | -3.6842 | |
| 4 | F | F | -1.7985 | |
| 5 | Q | F | -2.0900 | |
| 6 | F | F | -0.6031 | |
| 7 | Q | F | -1.5041 | |
| 8 | F | F | 0.0000 | |
| 9 | E | F | -3.1513 | |
| 10 | Q | F | -2.7695 | |
| 11 | Q | F | -3.1445 | |
| 1 | Q | G | -2.7009 | |
| 2 | Q | G | -2.7297 | |
| 3 | K | G | -2.0087 | |
| 4 | F | G | 0.2676 | |
| 5 | Q | G | -0.1396 | |
| 6 | F | G | 1.0125 | |
| 7 | Q | G | -0.4418 | |
| 8 | F | G | 0.2573 | |
| 9 | E | G | -2.2154 | |
| 10 | Q | G | -2.7684 | |
| 11 | Q | G | -2.7591 | |
| 1 | Q | H | -3.1871 | |
| 2 | Q | H | 0.0000 | |
| 3 | K | H | -2.3060 | |
| 4 | F | H | 0.0000 | |
| 5 | Q | H | -0.5986 | |
| 6 | F | H | 0.0000 | |
| 7 | Q | H | -0.5268 | |
| 8 | F | H | 0.0000 | |
| 9 | E | H | -2.3990 | |
| 10 | Q | H | -2.6160 | |
| 11 | Q | H | -2.9659 |