| Chain sequence(s) |
A: SSLVASPSGEIALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKTSSSRLSI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:56)
[INFO] Main: Simulation completed successfully. (00:05:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.2916 | |
| 2 | S | A | 0.9205 | |
| 3 | L | A | 2.7046 | |
| 4 | V | A | 2.6399 | |
| 5 | A | A | 1.2289 | |
| 6 | S | A | 0.0697 | |
| 7 | P | A | -0.4889 | |
| 8 | S | A | -0.9372 | |
| 9 | G | A | -0.9955 | |
| 10 | E | A | -1.0688 | |
| 11 | I | A | 1.4274 | |
| 12 | A | A | 1.2493 | |
| 13 | L | A | 1.3133 | |
| 14 | S | A | 0.0318 | |
| 15 | S | A | 0.0000 | |
| 16 | E | A | -2.1566 | |
| 17 | E | A | -1.7596 | |
| 18 | K | A | -1.3863 | |
| 19 | V | A | 0.0000 | |
| 20 | Y | A | -0.8957 | |
| 21 | N | A | -1.2672 | |
| 22 | V | A | 0.0000 | |
| 23 | V | A | 0.0000 | |
| 24 | L | A | -0.4773 | |
| 25 | K | A | -1.6595 | |
| 26 | Q | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | A | A | -1.2779 | |
| 29 | L | A | -1.0033 | |
| 30 | V | A | 0.0000 | |
| 31 | N | A | -2.1343 | |
| 32 | K | A | -2.6894 | |
| 33 | Q | A | -1.9635 | |
| 34 | L | A | -0.5950 | |
| 35 | R | A | -2.3290 | |
| 36 | S | A | -1.4174 | |
| 37 | S | A | -0.8012 | |
| 38 | S | A | -0.2733 | |
| 39 | Y | A | 0.4070 | |
| 40 | D | A | -1.2812 | |
| 41 | L | A | 0.3106 | |
| 42 | D | A | -1.2002 | |
| 43 | V | A | -0.4081 | |
| 44 | K | A | -2.4087 | |
| 45 | K | A | -3.1529 | |
| 46 | P | A | -2.1554 | |
| 47 | Q | A | -2.1397 | |
| 48 | D | A | -1.1081 | |
| 49 | V | A | 1.7545 | |
| 50 | V | A | 2.8036 | |
| 51 | L | A | 2.7023 | |
| 52 | P | A | 1.5946 | |
| 53 | G | A | 1.1165 | |
| 54 | S | A | 1.6700 | |
| 55 | L | A | 2.2126 | |
| 56 | S | A | 0.8251 | |
| 57 | L | A | 1.0783 | |
| 58 | L | A | 0.4278 | |
| 59 | G | A | -0.7903 | |
| 60 | E | A | -2.0042 | |
| 61 | A | A | 0.0000 | |
| 62 | Y | A | 0.0000 | |
| 63 | D | A | -3.3436 | |
| 64 | R | A | -2.9756 | |
| 65 | C | A | 0.0000 | |
| 66 | G | A | 0.0000 | |
| 67 | E | A | -3.1353 | |
| 68 | V | A | 0.0000 | |
| 69 | C | A | 0.0000 | |
| 70 | A | A | -1.5501 | |
| 71 | E | A | -2.2298 | |
| 72 | Y | A | -0.5023 | |
| 73 | A | A | -0.5608 | |
| 74 | K | A | -1.4788 | |
| 75 | T | A | 0.0550 | |
| 76 | F | A | 0.9582 | |
| 77 | Y | A | 0.4315 | |
| 78 | L | A | 1.3829 | |
| 79 | G | A | 1.0115 | |
| 80 | T | A | 0.0000 | |
| 81 | L | A | 1.3475 | |
| 82 | L | A | 0.9424 | |
| 83 | M | A | 0.0000 | |
| 84 | T | A | -0.6889 | |
| 85 | P | A | -1.2366 | |
| 86 | E | A | -2.3280 | |
| 87 | R | A | -1.3856 | |
| 88 | R | A | -1.0615 | |
| 89 | K | A | -1.6782 | |
| 90 | A | A | 0.0000 | |
| 91 | I | A | 0.0000 | |
| 92 | W | A | 0.0000 | |
| 93 | A | A | 0.0000 | |
| 94 | I | A | 0.0000 | |
| 95 | Y | A | 0.1882 | |
| 96 | V | A | 0.0000 | |
| 97 | W | A | 0.0000 | |
| 98 | C | A | 0.0000 | |
| 99 | R | A | -1.1229 | |
| 100 | R | A | -1.1847 | |
| 101 | T | A | 0.0000 | |
| 102 | D | A | -2.1139 | |
| 103 | E | A | -2.2953 | |
| 104 | L | A | -1.3505 | |
| 105 | V | A | 0.0000 | |
| 106 | D | A | -2.1664 | |
| 107 | G | A | -1.8058 | |
| 108 | P | A | -1.4436 | |
| 109 | N | A | -2.0179 | |
| 110 | A | A | -1.5713 | |
| 111 | S | A | -1.1276 | |
| 112 | H | A | -1.3610 | |
| 113 | I | A | -0.4667 | |
| 114 | T | A | -0.0601 | |
| 115 | P | A | -0.2777 | |
| 116 | M | A | -0.0463 | |
| 117 | A | A | -0.6645 | |
| 118 | L | A | 0.0000 | |
| 119 | D | A | -2.1488 | |
| 120 | R | A | -2.5712 | |
| 121 | W | A | 0.0000 | |
| 122 | E | A | -2.0157 | |
| 123 | A | A | -2.0137 | |
| 124 | R | A | -1.7960 | |
| 125 | L | A | 0.0000 | |
| 126 | E | A | -3.0255 | |
| 127 | D | A | -2.4150 | |
| 128 | L | A | 0.0000 | |
| 129 | F | A | -1.9018 | |
| 130 | R | A | -3.1094 | |
| 131 | G | A | -2.2986 | |
| 132 | R | A | -2.6676 | |
| 133 | P | A | -0.9300 | |
| 134 | F | A | 1.0116 | |
| 135 | D | A | 0.1447 | |
| 136 | M | A | 0.2474 | |
| 137 | L | A | -0.2080 | |
| 138 | D | A | 0.0000 | |
| 139 | A | A | 0.1518 | |
| 140 | A | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | A | A | -0.7840 | |
| 143 | D | A | -0.6336 | |
| 144 | T | A | 0.0000 | |
| 145 | V | A | -0.5864 | |
| 146 | A | A | -1.0053 | |
| 147 | R | A | -1.7273 | |
| 148 | Y | A | -0.8608 | |
| 149 | P | A | -0.6145 | |
| 150 | V | A | 0.0000 | |
| 151 | D | A | -0.5157 | |
| 152 | I | A | -0.4171 | |
| 153 | Q | A | -0.7035 | |
| 154 | P | A | 0.0000 | |
| 155 | F | A | 0.0000 | |
| 156 | R | A | -1.2592 | |
| 157 | D | A | 0.0000 | |
| 158 | M | A | 0.0000 | |
| 159 | I | A | 0.0000 | |
| 160 | E | A | -1.3060 | |
| 161 | G | A | 0.0000 | |
| 162 | M | A | 0.0000 | |
| 163 | R | A | -1.1416 | |
| 164 | M | A | 0.0000 | |
| 165 | D | A | -1.1563 | |
| 166 | L | A | -0.7557 | |
| 167 | K | A | -1.8353 | |
| 168 | K | A | -1.4145 | |
| 169 | S | A | -1.2014 | |
| 170 | R | A | -1.4053 | |
| 171 | Y | A | 0.0000 | |
| 172 | Q | A | -2.1924 | |
| 173 | N | A | -1.8101 | |
| 174 | F | A | -0.9209 | |
| 175 | D | A | -1.6116 | |
| 176 | D | A | -1.2898 | |
| 177 | L | A | 0.0000 | |
| 178 | Y | A | 0.0000 | |
| 179 | L | A | -0.4228 | |
| 180 | Y | A | 0.0000 | |
| 181 | C | A | 0.0000 | |
| 182 | Y | A | 0.0000 | |
| 183 | Y | A | 0.0000 | |
| 184 | V | A | 0.0267 | |
| 185 | A | A | 0.2529 | |
| 186 | G | A | 0.0000 | |
| 187 | T | A | 0.0000 | |
| 188 | V | A | 0.6981 | |
| 189 | G | A | 0.2305 | |
| 190 | L | A | 0.0000 | |
| 191 | M | A | 0.0000 | |
| 192 | S | A | 0.1151 | |
| 193 | V | A | 0.0000 | |
| 194 | P | A | -0.2156 | |
| 195 | V | A | 0.0000 | |
| 196 | M | A | 0.0000 | |
| 197 | G | A | -0.0009 | |
| 198 | I | A | -0.2326 | |
| 199 | D | A | 0.0000 | |
| 200 | P | A | -1.2706 | |
| 201 | K | A | -2.2429 | |
| 202 | S | A | -1.7910 | |
| 203 | K | A | -2.1922 | |
| 204 | A | A | -1.4115 | |
| 205 | T | A | -0.8573 | |
| 206 | T | A | -0.6817 | |
| 207 | E | A | -0.8940 | |
| 208 | S | A | -0.8486 | |
| 209 | V | A | 0.0000 | |
| 210 | Y | A | 0.0000 | |
| 211 | N | A | -0.6632 | |
| 212 | A | A | 0.0000 | |
| 213 | A | A | -0.3457 | |
| 214 | L | A | 0.0000 | |
| 215 | A | A | 0.0000 | |
| 216 | L | A | -0.2525 | |
| 217 | G | A | 0.0846 | |
| 218 | I | A | 0.0000 | |
| 219 | A | A | 0.0000 | |
| 220 | N | A | -0.3682 | |
| 221 | Q | A | -0.2706 | |
| 222 | L | A | 0.0000 | |
| 223 | T | A | 0.0000 | |
| 224 | N | A | -0.4770 | |
| 225 | I | A | 0.0000 | |
| 226 | L | A | 0.0000 | |
| 227 | R | A | -1.0449 | |
| 228 | D | A | -1.4086 | |
| 229 | V | A | 0.0000 | |
| 230 | G | A | 0.0000 | |
| 231 | E | A | -2.8559 | |
| 232 | D | A | -2.0530 | |
| 233 | A | A | -1.9382 | |
| 234 | R | A | -2.9735 | |
| 235 | R | A | -3.1385 | |
| 236 | G | A | -1.8498 | |
| 237 | R | A | -1.5785 | |
| 238 | V | A | 0.0000 | |
| 239 | Y | A | 0.0000 | |
| 240 | L | A | 0.0000 | |
| 241 | P | A | 0.0000 | |
| 242 | Q | A | -1.8795 | |
| 243 | D | A | -2.3346 | |
| 244 | E | A | -1.5830 | |
| 245 | L | A | 0.0000 | |
| 246 | A | A | -1.3343 | |
| 247 | Q | A | -1.7815 | |
| 248 | A | A | -1.6664 | |
| 249 | G | A | -1.2952 | |
| 250 | L | A | 0.0000 | |
| 251 | S | A | -1.1683 | |
| 252 | D | A | -1.0611 | |
| 253 | E | A | -1.6026 | |
| 254 | D | A | -1.1709 | |
| 255 | I | A | 0.0000 | |
| 256 | F | A | 0.0724 | |
| 257 | A | A | -0.2979 | |
| 258 | G | A | -0.7482 | |
| 259 | K | A | -1.3004 | |
| 260 | V | A | -1.3043 | |
| 261 | T | A | -1.9734 | |
| 262 | D | A | -3.1549 | |
| 263 | K | A | -3.1177 | |
| 264 | W | A | 0.0000 | |
| 265 | R | A | -2.6642 | |
| 266 | N | A | -2.7480 | |
| 267 | F | A | 0.0000 | |
| 268 | M | A | 0.0000 | |
| 269 | K | A | -1.9823 | |
| 270 | M | A | -0.8412 | |
| 271 | Q | A | 0.0000 | |
| 272 | L | A | 0.0000 | |
| 273 | K | A | -1.8335 | |
| 274 | R | A | -1.1537 | |
| 275 | A | A | 0.0000 | |
| 276 | R | A | -1.3312 | |
| 277 | M | A | -0.7907 | |
| 278 | F | A | 0.0000 | |
| 279 | F | A | 0.0000 | |
| 280 | D | A | -2.3677 | |
| 281 | E | A | -1.8270 | |
| 282 | A | A | 0.0000 | |
| 283 | E | A | -1.8638 | |
| 284 | K | A | -2.5142 | |
| 285 | G | A | 0.0000 | |
| 286 | V | A | 0.0000 | |
| 287 | T | A | -0.6374 | |
| 288 | E | A | -1.4799 | |
| 289 | L | A | 0.0000 | |
| 290 | S | A | -0.2400 | |
| 291 | A | A | 0.3019 | |
| 292 | A | A | 0.0566 | |
| 293 | S | A | 0.0000 | |
| 294 | R | A | 0.3179 | |
| 295 | W | A | 0.8509 | |
| 296 | P | A | 0.0000 | |
| 297 | V | A | 0.2932 | |
| 298 | W | A | 0.0000 | |
| 299 | A | A | 0.0000 | |
| 300 | S | A | 0.3362 | |
| 301 | L | A | 0.0000 | |
| 302 | L | A | 0.0271 | |
| 303 | L | A | 0.1606 | |
| 304 | Y | A | -0.1513 | |
| 305 | R | A | -1.1418 | |
| 306 | R | A | -1.3342 | |
| 307 | I | A | 0.0000 | |
| 308 | L | A | 0.0000 | |
| 309 | D | A | -1.8963 | |
| 310 | E | A | -1.4650 | |
| 311 | I | A | 0.0000 | |
| 312 | E | A | -1.9869 | |
| 313 | A | A | -1.2211 | |
| 314 | N | A | -1.7516 | |
| 315 | D | A | -1.7198 | |
| 316 | Y | A | 0.0000 | |
| 317 | N | A | -1.5792 | |
| 318 | N | A | 0.0000 | |
| 319 | F | A | 0.0000 | |
| 320 | T | A | -1.3618 | |
| 321 | K | A | -2.0461 | |
| 322 | R | A | -2.3174 | |
| 323 | A | A | 0.0000 | |
| 324 | Y | A | 0.2578 | |
| 325 | V | A | 0.0000 | |
| 326 | G | A | -0.1518 | |
| 327 | K | A | -0.6383 | |
| 328 | V | A | 1.0613 | |
| 329 | K | A | -0.1634 | |
| 330 | K | A | 0.1410 | |
| 331 | I | A | 1.8587 | |
| 332 | A | A | 1.0135 | |
| 333 | A | A | 0.0000 | |
| 334 | L | A | 1.1415 | |
| 335 | P | A | 0.9124 | |
| 336 | L | A | 1.1416 | |
| 337 | A | A | 0.0000 | |
| 338 | Y | A | 1.7814 | |
| 339 | A | A | 1.2777 | |
| 340 | K | A | 0.6405 | |
| 341 | S | A | 0.0000 | |
| 342 | V | A | 2.1381 | |
| 343 | L | A | 1.4549 | |
| 344 | K | A | -0.7538 | |
| 345 | T | A | -0.8101 | |
| 346 | S | A | -0.9480 | |
| 347 | S | A | -0.9678 | |
| 348 | S | A | -0.8853 | |
| 349 | R | A | -1.0793 | |
| 350 | L | A | 1.0210 | |
| 351 | S | A | 0.9415 | |
| 352 | I | A | 2.1108 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine