Project name: GGKGHGF4

Status: done

Started: 2026-05-21 08:46:35
Settings
Chain sequence(s) A: GGKGHGF
C: GGKGHGF
B: GGKGHGF
D: GGKGHGF
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:23)
Show buried residues

Minimal score value
-2.6886
Maximal score value
2.3898
Average score
-0.9447
Total score value
-26.4523

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.6871
2 G A -2.3781
3 K A -2.6886
4 G A -1.7437
5 H A -0.6981
6 G A -0.4607
7 F A 0.0504
1 G B -1.9794
2 G B -2.5856
3 K B -2.6870
4 G B -1.9237
5 H B -0.7722
6 G B -0.3865
7 F B -0.1021
1 G C -1.4293
2 G C -2.0563
3 K C -2.1384
4 G C 0.0000
5 H C 0.0446
6 G C 0.0000
7 F C 2.3898
1 G D -1.3373
2 G D -1.5102
3 K D -2.3382
4 G D 0.0000
5 H D -0.3169
6 G D 0.0000
7 F D 2.2823
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Laboratory of Theory of Biopolymers 2018