| Chain sequence(s) |
A: GGKGHGF
C: GGKGHGF B: GGKGHGF D: GGKGHGF input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.6871 | |
| 2 | G | A | -2.3781 | |
| 3 | K | A | -2.6886 | |
| 4 | G | A | -1.7437 | |
| 5 | H | A | -0.6981 | |
| 6 | G | A | -0.4607 | |
| 7 | F | A | 0.0504 | |
| 1 | G | B | -1.9794 | |
| 2 | G | B | -2.5856 | |
| 3 | K | B | -2.6870 | |
| 4 | G | B | -1.9237 | |
| 5 | H | B | -0.7722 | |
| 6 | G | B | -0.3865 | |
| 7 | F | B | -0.1021 | |
| 1 | G | C | -1.4293 | |
| 2 | G | C | -2.0563 | |
| 3 | K | C | -2.1384 | |
| 4 | G | C | 0.0000 | |
| 5 | H | C | 0.0446 | |
| 6 | G | C | 0.0000 | |
| 7 | F | C | 2.3898 | |
| 1 | G | D | -1.3373 | |
| 2 | G | D | -1.5102 | |
| 3 | K | D | -2.3382 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | -0.3169 | |
| 6 | G | D | 0.0000 | |
| 7 | F | D | 2.2823 |