| Chain sequence(s) |
B: VVVQPTVTISVEGGTVTVTISNLTLESFTARLTSSGPEPVISTHLVVSVP
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | B | 2.9783 | |
| 2 | V | B | 3.1301 | |
| 3 | V | B | 2.3278 | |
| 4 | Q | B | 0.3561 | |
| 5 | P | B | 0.2323 | |
| 6 | T | B | 0.5263 | |
| 7 | V | B | 2.0810 | |
| 8 | T | B | 1.9153 | |
| 9 | I | B | 3.0291 | |
| 10 | S | B | 1.4599 | |
| 11 | V | B | 1.2560 | |
| 12 | E | B | -1.2747 | |
| 13 | G | B | -1.1225 | |
| 14 | G | B | -0.7741 | |
| 15 | T | B | -0.2858 | |
| 16 | V | B | 1.2533 | |
| 17 | T | B | 1.1527 | |
| 18 | V | B | 2.1790 | |
| 19 | T | B | 1.3630 | |
| 20 | I | B | 1.2756 | |
| 21 | S | B | 0.0980 | |
| 22 | N | B | -0.4352 | |
| 23 | L | B | 0.4400 | |
| 24 | T | B | 0.5903 | |
| 25 | L | B | 0.7355 | |
| 26 | E | B | -0.8232 | |
| 27 | S | B | 0.0470 | |
| 28 | F | B | 0.7292 | |
| 29 | T | B | 0.5228 | |
| 30 | A | B | -0.2157 | |
| 31 | R | B | -1.1293 | |
| 32 | L | B | 0.1413 | |
| 33 | T | B | -0.0030 | |
| 34 | S | B | -0.2742 | |
| 35 | S | B | -0.7672 | |
| 36 | G | B | -1.2087 | |
| 37 | P | B | -1.3029 | |
| 38 | E | B | -1.6632 | |
| 39 | P | B | -0.5099 | |
| 40 | V | B | 0.6032 | |
| 41 | I | B | 1.5579 | |
| 42 | S | B | 0.4721 | |
| 43 | T | B | -0.0535 | |
| 44 | H | B | -0.5713 | |
| 45 | L | B | 0.8659 | |
| 46 | V | B | 1.7785 | |
| 47 | V | B | 1.0789 | |
| 48 | S | B | 0.5774 | |
| 49 | V | B | 0.5871 | |
| 50 | P | B | -0.0494 |