| Chain sequence(s) |
A: MRPPQFTRAQWFAIQHISLNPPRCTIAMRAINNYRWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNISNCRYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | HA15A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 1.53255 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:02:05)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:32)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:28)
[INFO] Main: Simulation completed successfully. (00:03:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | M | A | 0.9170 | |
| 1 | R | A | -0.5326 | |
| 2 | P | A | 0.0000 | |
| 3 | P | A | -0.4734 | |
| 4 | Q | A | -1.1787 | |
| 5 | F | A | 0.1442 | |
| 6 | T | A | 0.0000 | |
| 7 | R | A | -0.7806 | |
| 8 | A | A | 0.0000 | |
| 9 | Q | A | -0.7136 | |
| 10 | W | A | -0.0043 | |
| 11 | F | A | 0.0000 | |
| 12 | A | A | 0.1797 | |
| 13 | I | A | 0.7415 | |
| 14 | Q | A | -0.0506 | |
| 15 | A | A | 0.0000 | mutated: HA15A |
| 16 | I | A | 0.2222 | |
| 17 | S | A | 0.2483 | |
| 18 | L | A | 1.0137 | |
| 19 | N | A | -1.0238 | |
| 20 | P | A | -0.3105 | |
| 21 | P | A | -0.5281 | |
| 22 | R | A | -1.8775 | |
| 23 | C | A | 0.0000 | |
| 24 | T | A | 0.1761 | |
| 25 | I | A | 1.0059 | |
| 26 | A | A | 0.1921 | |
| 27 | M | A | 0.0000 | |
| 28 | R | A | -1.8350 | |
| 29 | A | A | -0.2906 | |
| 30 | I | A | 0.0000 | |
| 31 | N | A | -0.5238 | |
| 32 | N | A | -1.1691 | |
| 33 | Y | A | 0.2847 | |
| 34 | R | A | -0.7829 | |
| 35 | W | A | 0.7348 | |
| 36 | R | A | -1.1036 | |
| 37 | C | A | 0.0000 | |
| 38 | K | A | -0.5258 | |
| 39 | N | A | -1.5175 | |
| 40 | Q | A | -1.2770 | |
| 41 | N | A | 0.0000 | |
| 42 | T | A | -0.0085 | |
| 43 | F | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | R | A | -0.5788 | |
| 46 | T | A | 0.0000 | |
| 47 | T | A | 0.0650 | |
| 48 | F | A | 0.4741 | |
| 49 | A | A | -0.0521 | |
| 50 | N | A | -0.9115 | |
| 51 | V | A | 0.0000 | |
| 52 | V | A | -0.0505 | |
| 53 | N | A | -1.2398 | |
| 54 | V | A | 0.0000 | |
| 55 | C | A | 0.0000 | |
| 56 | G | A | -0.5219 | |
| 57 | N | A | -0.6092 | |
| 58 | Q | A | -1.2759 | |
| 59 | S | A | -0.2081 | |
| 60 | I | A | 0.3629 | |
| 61 | R | A | -1.9163 | |
| 62 | C | A | 0.0000 | |
| 63 | P | A | -0.2654 | |
| 64 | H | A | -1.1460 | |
| 65 | N | A | -1.3011 | |
| 66 | R | A | -2.0025 | |
| 67 | T | A | -0.2834 | |
| 68 | L | A | 0.4350 | |
| 69 | N | A | -1.5333 | |
| 70 | N | A | -0.7095 | |
| 71 | C | A | 0.0000 | |
| 72 | H | A | 0.0000 | |
| 73 | R | A | -0.6853 | |
| 74 | S | A | 0.0000 | |
| 75 | R | A | -1.6899 | |
| 76 | F | A | 0.1356 | |
| 77 | R | A | -1.7271 | |
| 78 | V | A | 0.0000 | |
| 79 | P | A | -0.4139 | |
| 80 | L | A | 0.0000 | |
| 81 | L | A | 0.1341 | |
| 82 | H | A | 0.0000 | |
| 83 | C | A | 0.0000 | |
| 84 | D | A | -0.3539 | |
| 85 | L | A | 0.4289 | |
| 86 | I | A | 1.5579 | |
| 87 | N | A | -0.0477 | |
| 88 | P | A | -0.3941 | |
| 89 | G | A | -0.5029 | |
| 90 | A | A | -0.1475 | |
| 91 | Q | A | -0.8784 | |
| 92 | N | A | -1.1876 | |
| 93 | I | A | 0.8154 | |
| 94 | S | A | -0.2450 | |
| 95 | N | A | -1.2972 | |
| 96 | C | A | -0.4901 | |
| 97 | R | A | -1.7910 | |
| 98 | Y | A | 0.0000 | |
| 99 | A | A | -0.0417 | |
| 100 | D | A | -0.6203 | |
| 101 | R | A | -1.3489 | |
| 102 | P | A | -0.4817 | |
| 103 | G | A | -0.5077 | |
| 104 | R | A | -1.9797 | |
| 105 | R | A | -1.0584 | |
| 106 | F | A | -0.1138 | |
| 107 | Y | A | 0.0000 | |
| 108 | V | A | 0.0000 | |
| 109 | V | A | 0.0000 | |
| 110 | A | A | 0.0000 | |
| 111 | C | A | 0.0000 | |
| 112 | D | A | -1.0844 | |
| 113 | N | A | -1.3893 | |
| 114 | R | A | -0.6336 | |
| 115 | D | A | -0.5194 | |
| 116 | P | A | -0.6628 | |
| 117 | R | A | -1.9226 | |
| 118 | D | A | -0.5336 | |
| 119 | S | A | -0.1798 | |
| 120 | P | A | -0.6160 | |
| 121 | R | A | -1.8136 | |
| 122 | Y | A | 0.0483 | |
| 123 | P | A | -0.0315 | |
| 124 | V | A | 0.5826 | |
| 125 | V | A | 0.0000 | |
| 126 | P | A | 0.0000 | |
| 127 | V | A | 0.0796 | |
| 128 | H | A | -0.8853 | |
| 129 | L | A | 0.0841 | |
| 130 | D | A | -0.1862 | |
| 131 | T | A | -0.0587 | |
| 132 | T | A | 0.3553 | |
| 133 | I | A | 2.0103 |