| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYGMGWFRQAPGKGRELVAAINSNGGSTYYPDSVEGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCASGDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:48)
[INFO] Main: Simulation completed successfully. (00:00:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1501 | |
| 2 | V | A | -1.1512 | |
| 3 | Q | A | -1.1129 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.2260 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.4884 | |
| 8 | G | A | -1.0694 | |
| 9 | G | A | -0.7911 | |
| 10 | G | A | -0.0662 | |
| 11 | L | A | 0.9311 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.3677 | |
| 14 | P | A | -1.5602 | |
| 15 | G | A | -1.4464 | |
| 16 | G | A | -1.0758 | |
| 17 | S | A | -1.4177 | |
| 18 | L | A | -0.9112 | |
| 19 | R | A | -1.8791 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.2348 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1471 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.8642 | |
| 26 | G | A | -1.2298 | |
| 27 | F | A | -0.4190 | |
| 28 | T | A | -0.1062 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.7883 | |
| 31 | S | A | -0.1441 | |
| 32 | Y | A | 0.5120 | |
| 33 | G | A | -0.3900 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0839 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.7592 | |
| 40 | A | A | -1.7954 | |
| 41 | P | A | -1.2883 | |
| 42 | G | A | -1.7231 | |
| 43 | K | A | -2.7646 | |
| 44 | G | A | -2.4205 | |
| 45 | R | A | -2.4253 | |
| 46 | E | A | -1.3378 | |
| 47 | L | A | 0.1916 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.3867 | |
| 51 | I | A | 0.0000 | |
| 52 | N | A | -0.9407 | |
| 53 | S | A | -0.9833 | |
| 54 | N | A | -1.8384 | |
| 55 | G | A | -1.5495 | |
| 56 | G | A | -1.2236 | |
| 57 | S | A | -0.6500 | |
| 58 | T | A | 0.2247 | |
| 59 | Y | A | 0.8694 | |
| 60 | Y | A | -0.2864 | |
| 61 | P | A | -1.1142 | |
| 62 | D | A | -2.4810 | |
| 63 | S | A | -1.8513 | |
| 64 | V | A | 0.0000 | |
| 65 | E | A | -2.6230 | |
| 66 | G | A | -1.9661 | |
| 67 | R | A | -1.8870 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.8499 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.5283 | |
| 72 | R | A | -1.3209 | |
| 73 | D | A | -1.7042 | |
| 74 | N | A | -2.0120 | |
| 75 | A | A | -1.4916 | |
| 76 | K | A | -2.4416 | |
| 77 | R | A | -2.1495 | |
| 78 | M | A | -1.0114 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.4701 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.4028 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -2.0491 | |
| 85 | S | A | -1.4770 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.1267 | |
| 88 | A | A | -1.6156 | |
| 89 | E | A | -2.1696 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8804 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.7255 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.0735 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | S | A | 0.0000 | |
| 99 | G | A | -0.7904 | |
| 100 | D | A | -1.4209 | |
| 101 | Y | A | 0.0365 | |
| 102 | W | A | 0.3160 | |
| 103 | G | A | 0.1639 | |
| 104 | Q | A | -0.8476 | |
| 105 | G | A | -0.4739 | |
| 106 | T | A | -0.7524 | |
| 107 | Q | A | -1.1031 | |
| 108 | V | A | 0.0000 | |
| 109 | T | A | -0.3593 | |
| 110 | V | A | 0.0000 | |
| 111 | S | A | -0.7669 | |
| 112 | S | A | -0.5313 |