Project name: GGKGHFF4

Status: done

Started: 2026-02-23 07:24:46
Settings
Chain sequence(s) A: GGKGHFF
C: GGKGHFF
B: GGKGHFF
D: GGKGHFF
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:11)
Show buried residues

Minimal score value
-3.0257
Maximal score value
3.8133
Average score
0.1457
Total score value
4.0782

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.7884
2 G A -2.6021
3 K A -3.0257
4 G A -0.8340
5 H A 0.0000
6 F A 2.3031
7 F A 3.7958
1 G B -1.6028
2 G B -1.4580
3 K B -2.1497
4 G B -0.4504
5 H B 0.8639
6 F B 1.4745
7 F B 2.1451
1 G C -1.7463
2 G C -1.5200
3 K C -1.6063
4 G C 0.0000
5 H C 1.9492
6 F C 3.8133
7 F C 3.5182
1 G D -1.2469
2 G D -1.4748
3 K D -1.2554
4 G D 0.0000
5 H D 2.1079
6 F D 2.6071
7 F D 2.2609
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Laboratory of Theory of Biopolymers 2018