| Chain sequence(s) |
A: EQAALIAEAERIAARVRANMAEAEAVIREGDAASQAHLPAFRAQAAELDALTAELLAALRAEDWEAAAATLRRLLAAGEEYIAIMEKAKVPQELIDRARQIRAEGERLLEKLAAAVAAHS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:01)
[INFO] Main: Simulation completed successfully. (00:02:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0887 | |
| 2 | Q | A | -2.0402 | |
| 3 | A | A | -1.1243 | |
| 4 | A | A | -0.8947 | |
| 5 | L | A | 0.0000 | |
| 6 | I | A | -1.4816 | |
| 7 | A | A | -1.2975 | |
| 8 | E | A | -1.9496 | |
| 9 | A | A | 0.0000 | |
| 10 | E | A | -2.7044 | |
| 11 | R | A | -2.9419 | |
| 12 | I | A | -1.8533 | |
| 13 | A | A | -1.6587 | |
| 14 | A | A | -1.5075 | |
| 15 | R | A | -1.5019 | |
| 16 | V | A | -1.2638 | |
| 17 | R | A | -1.0223 | |
| 18 | A | A | -0.8020 | |
| 19 | N | A | 0.0000 | |
| 20 | M | A | 0.0000 | |
| 21 | A | A | -0.9146 | |
| 22 | E | A | -1.6957 | |
| 23 | A | A | 0.0000 | |
| 24 | E | A | -1.8968 | |
| 25 | A | A | -1.5193 | |
| 26 | V | A | -1.6148 | |
| 27 | I | A | 0.0000 | |
| 28 | R | A | -3.2259 | |
| 29 | E | A | -3.1898 | |
| 30 | G | A | -2.8862 | |
| 31 | D | A | -2.9055 | |
| 32 | A | A | -1.6359 | |
| 33 | A | A | -1.2340 | |
| 34 | S | A | -2.4707 | |
| 35 | Q | A | -2.4943 | |
| 36 | A | A | -1.1337 | |
| 37 | H | A | -1.4346 | |
| 38 | L | A | -1.2051 | |
| 39 | P | A | -0.9744 | |
| 40 | A | A | -0.8094 | |
| 41 | F | A | 0.0000 | |
| 42 | R | A | -2.1311 | |
| 43 | A | A | -1.3876 | |
| 44 | Q | A | -1.6270 | |
| 45 | A | A | -1.6086 | |
| 46 | A | A | -1.6109 | |
| 47 | E | A | -2.2155 | |
| 48 | L | A | 0.0000 | |
| 49 | D | A | -2.1550 | |
| 50 | A | A | -1.5726 | |
| 51 | L | A | 0.0000 | |
| 52 | T | A | -1.5399 | |
| 53 | A | A | -1.4153 | |
| 54 | E | A | -2.0628 | |
| 55 | L | A | 0.0000 | |
| 56 | L | A | -1.1997 | |
| 57 | A | A | -1.4560 | |
| 58 | A | A | -2.0414 | |
| 59 | L | A | 0.0000 | |
| 60 | R | A | -2.6927 | |
| 61 | A | A | -2.0674 | |
| 62 | E | A | -3.4140 | |
| 63 | D | A | -2.9323 | |
| 64 | W | A | 0.0000 | |
| 65 | E | A | -2.3720 | |
| 66 | A | A | -1.8243 | |
| 67 | A | A | 0.0000 | |
| 68 | A | A | -1.7164 | |
| 69 | A | A | -1.4670 | |
| 70 | T | A | -1.7804 | |
| 71 | L | A | 0.0000 | |
| 72 | R | A | -2.7813 | |
| 73 | R | A | -2.7716 | |
| 74 | L | A | -2.4276 | |
| 75 | L | A | 0.0000 | |
| 76 | A | A | -2.0238 | |
| 77 | A | A | 0.0000 | |
| 78 | G | A | -2.3268 | |
| 79 | E | A | -2.8014 | |
| 80 | E | A | -2.5753 | |
| 81 | Y | A | 0.0000 | |
| 82 | I | A | 0.0000 | |
| 83 | A | A | -2.1401 | |
| 84 | I | A | -2.0504 | |
| 85 | M | A | 0.0000 | |
| 86 | E | A | -3.4931 | |
| 87 | K | A | -2.9995 | |
| 88 | A | A | 0.0000 | |
| 89 | K | A | -3.2888 | |
| 90 | V | A | 0.0000 | |
| 91 | P | A | -2.1849 | |
| 92 | Q | A | -3.1905 | |
| 93 | E | A | -3.3255 | |
| 94 | L | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | D | A | -3.6536 | |
| 97 | R | A | -3.1568 | |
| 98 | A | A | 0.0000 | |
| 99 | R | A | -3.6933 | |
| 100 | Q | A | -2.8079 | |
| 101 | I | A | 0.0000 | |
| 102 | R | A | -2.5388 | |
| 103 | A | A | -2.2133 | |
| 104 | E | A | -2.4784 | |
| 105 | G | A | 0.0000 | |
| 106 | E | A | -3.1706 | |
| 107 | R | A | -3.4809 | |
| 108 | L | A | 0.0000 | |
| 109 | L | A | -2.4803 | |
| 110 | E | A | -3.1726 | |
| 111 | K | A | -2.4333 | |
| 112 | L | A | 0.0000 | |
| 113 | A | A | -1.1780 | |
| 114 | A | A | -0.7258 | |
| 115 | A | A | -1.3816 | |
| 116 | V | A | -1.0240 | |
| 117 | A | A | -0.3703 | |
| 118 | A | A | -0.2857 | |
| 119 | H | A | -1.3811 | |
| 120 | S | A | -0.7106 |