| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLKLSCAASGRTFSSYAMGWFRQAPGKGRELVAAIRWSGGYAYYTDSVKGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAATYLSSDYSRYALPQRPLDYDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:50)
[INFO] Main: Simulation completed successfully. (00:01:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.4859 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.3593 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.2197 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.4914 | |
| 8 | G | A | -1.0994 | |
| 9 | G | A | -0.8415 | |
| 10 | G | A | -0.1060 | |
| 11 | L | A | 0.9164 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.4007 | |
| 14 | P | A | -1.6004 | |
| 15 | G | A | -1.4012 | |
| 16 | G | A | -0.9696 | |
| 17 | S | A | -1.2860 | |
| 18 | L | A | -1.0182 | |
| 19 | K | A | -1.9995 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.2673 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1001 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.3865 | |
| 26 | G | A | -2.1175 | |
| 27 | R | A | -2.4344 | |
| 28 | T | A | -1.2393 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.7702 | |
| 31 | S | A | -0.1081 | |
| 32 | Y | A | 0.0000 | |
| 33 | A | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.8170 | |
| 40 | A | A | -1.7666 | |
| 41 | P | A | -1.2073 | |
| 42 | G | A | -1.6502 | |
| 43 | K | A | -2.7358 | |
| 44 | G | A | -2.3336 | |
| 45 | R | A | -2.6311 | |
| 46 | E | A | -2.7311 | |
| 47 | L | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | R | A | 0.0000 | |
| 53 | W | A | -0.0528 | |
| 54 | S | A | -0.5213 | |
| 55 | G | A | -0.6300 | |
| 56 | G | A | -0.5532 | |
| 57 | Y | A | 0.0737 | |
| 58 | A | A | 0.4356 | |
| 59 | Y | A | 0.1703 | |
| 60 | Y | A | -0.8001 | |
| 61 | T | A | -1.4691 | |
| 62 | D | A | -2.4453 | |
| 63 | S | A | -1.7617 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.5688 | |
| 66 | G | A | -1.7525 | |
| 67 | R | A | -1.5381 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.7858 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.3693 | |
| 72 | R | A | -0.9604 | |
| 73 | D | A | -1.5636 | |
| 74 | N | A | -1.7790 | |
| 75 | A | A | -1.4957 | |
| 76 | K | A | -2.4377 | |
| 77 | R | A | -2.3499 | |
| 78 | M | A | -0.9755 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.3453 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.2664 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.3999 | |
| 85 | S | A | -1.1807 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.2093 | |
| 88 | A | A | -1.6959 | |
| 89 | E | A | -2.2130 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8975 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.6467 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.3116 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | T | A | 0.0000 | |
| 100 | Y | A | 0.9077 | |
| 101 | L | A | 0.0000 | |
| 102 | S | A | -0.3680 | |
| 103 | S | A | -1.1672 | |
| 104 | D | A | -2.0536 | |
| 105 | Y | A | -0.8271 | |
| 106 | S | A | -0.9366 | |
| 107 | R | A | -1.5068 | |
| 108 | Y | A | 0.5161 | |
| 109 | A | A | 0.1621 | |
| 110 | L | A | 0.0000 | |
| 111 | P | A | -0.6720 | |
| 112 | Q | A | -1.7396 | |
| 113 | R | A | -2.2894 | |
| 114 | P | A | -1.2950 | |
| 115 | L | A | 0.2787 | |
| 116 | D | A | -0.6593 | |
| 117 | Y | A | 0.0000 | |
| 118 | D | A | -1.1997 | |
| 119 | Y | A | -0.9174 | |
| 120 | W | A | -0.2738 | |
| 121 | G | A | -0.1206 | |
| 122 | Q | A | -0.8765 | |
| 123 | G | A | -0.5360 | |
| 124 | T | A | -0.7382 | |
| 125 | Q | A | -1.0837 | |
| 126 | V | A | 0.0000 | |
| 127 | T | A | -0.3741 | |
| 128 | V | A | 0.0000 | |
| 129 | S | A | -0.7513 | |
| 130 | S | A | -0.5759 |