Project name: 4a2920546d67e42

Status: done

Started: 2026-06-27 16:06:53
Settings
Chain sequence(s) A: EDEDEDEDEDEDGGKGHFG
C: EDEDEDEDEDEDGGKGHFG
B: EDEDEDEDEDEDGGKGHFG
E: EDEDEDEDEDEDGGKGHFG
D: EDEDEDEDEDEDGGKGHFG
G: EDEDEDEDEDEDGGKGHFG
F: EDEDEDEDEDEDGGKGHFG
I: EDEDEDEDEDEDGGKGHFG
H: EDEDEDEDEDEDGGKGHFG
K: EDEDEDEDEDEDGGKGHFG
J: EDEDEDEDEDEDGGKGHFG
L: EDEDEDEDEDEDGGKGHFG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:10:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:10:25)
Show buried residues

Minimal score value
-5.6558
Maximal score value
0.2724
Average score
-2.4253
Total score value
-552.9678

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -4.4452
2 D A -4.5307
3 E A -5.1731
4 D A 0.0000
5 E A -4.9813
6 D A 0.0000
7 E A -5.0603
8 D A -4.1636
9 E A -5.3185
10 D A 0.0000
11 E A -4.7992
12 D A 0.0000
13 G A -2.1098
14 G A 0.0000
15 K A -1.3353
16 G A 0.0000
17 H A 0.0000
18 F A 0.0000
19 G A -0.2024
1 E B -4.1464
2 D B -4.5826
3 E B -5.1593
4 D B -4.4043
5 E B -4.4425
6 D B -3.2633
7 E B -4.2475
8 D B -3.4782
9 E B -4.4207
10 D B -3.5791
11 E B -4.1025
12 D B -2.5201
13 G B -1.8881
14 G B -1.1520
15 K B -1.8139
16 G B -2.1429
17 H B 0.0000
18 F B 0.2724
19 G B -0.1177
1 E C -4.1830
2 D C -4.6207
3 E C -4.8321
4 D C -3.7443
5 E C -3.7940
6 D C -2.6446
7 E C -4.0559
8 D C -3.2924
9 E C -4.6500
10 D C -3.9603
11 E C -4.2072
12 D C -2.6765
13 G C -1.9497
14 G C -1.2874
15 K C -2.3190
16 G C -2.8756
17 H C -1.0297
18 F C -0.3376
19 G C -0.5197
1 E D -4.5282
2 D D -4.4888
3 E D -4.7212
4 D D 0.0000
5 E D -4.0484
6 D D 0.0000
7 E D -4.8029
8 D D -4.0880
9 E D -5.5632
10 D D 0.0000
11 E D -4.8636
12 D D 0.0000
13 G D -2.1038
14 G D 0.0000
15 K D -1.5878
16 G D 0.0000
17 H D 0.0000
18 F D 0.0000
19 G D -0.3633
1 E E -4.0532
2 D E -3.7295
3 E E -3.7234
4 D E 0.0000
5 E E -3.3399
6 D E 0.0000
7 E E -4.5728
8 D E -3.7633
9 E E -5.3059
10 D E 0.0000
11 E E -4.5994
12 D E 0.0000
13 G E -1.9327
14 G E 0.0000
15 K E -1.3550
16 G E 0.0000
17 H E 0.0000
18 F E 0.0000
19 G E -0.5659
1 E F -4.0121
2 D F -3.4717
3 E F -3.7632
4 D F 0.0000
5 E F -3.6317
6 D F 0.0000
7 E F -4.5072
8 D F 0.0000
9 E F -5.0346
10 D F 0.0000
11 E F -4.6216
12 D F 0.0000
13 G F -1.9484
14 G F 0.0000
15 K F -1.5749
16 G F 0.0000
17 H F 0.0000
18 F F 0.0000
19 G F -0.5683
1 E G -4.4887
2 D G -4.3195
3 E G -4.8020
4 D G 0.0000
5 E G -4.5616
6 D G 0.0000
7 E G -5.0343
8 D G 0.0000
9 E G -5.5202
10 D G 0.0000
11 E G -4.9261
12 D G 0.0000
13 G G -2.2764
14 G G 0.0000
15 K G -2.5077
16 G G 0.0000
17 H G 0.0000
18 F G 0.0000
19 G G -0.8971
1 E H -3.9056
2 D H -4.5967
3 E H -4.8721
4 D H -4.2227
5 E H -4.4049
6 D H -3.6100
7 E H -4.6301
8 D H -3.9759
9 E H -4.9500
10 D H -4.4805
11 E H -4.4671
12 D H -3.0600
13 G H -2.1772
14 G H -1.9405
15 K H -3.0394
16 G H -2.9447
17 H H -1.3848
18 F H -0.5129
19 G H -1.1088
1 E I -4.0653
2 D I -4.9391
3 E I -5.2045
4 D I -4.5663
5 E I -4.5623
6 D I -3.5303
7 E I -4.4108
8 D I -3.8628
9 E I -4.8257
10 D I -4.5722
11 E I -4.4964
12 D I -3.1513
13 G I -2.1787
14 G I -1.9611
15 K I -2.5420
16 G I -2.6592
17 H I -1.5118
18 F I -1.0904
19 G I -1.2134
1 E J -4.6156
2 D J -4.4530
3 E J -5.1028
4 D J 0.0000
5 E J -5.0225
6 D J 0.0000
7 E J -5.4306
8 D J -4.6067
9 E J -5.6558
10 D J 0.0000
11 E J -5.0474
12 D J 0.0000
13 G J -2.3147
14 G J 0.0000
15 K J -1.8640
16 G J 0.0000
17 H J 0.0000
18 F J 0.0000
19 G J -1.0187
1 E K -4.0825
2 D K -3.6586
3 E K -4.2370
4 D K 0.0000
5 E K -4.3524
6 D K 0.0000
7 E K -4.9768
8 D K -4.0780
9 E K -5.1350
10 D K 0.0000
11 E K -4.7240
12 D K 0.0000
13 G K -2.0118
14 G K 0.0000
15 K K -1.3186
16 G K 0.0000
17 H K 0.0000
18 F K 0.0000
19 G K -0.6868
1 E L -4.0708
2 D L -3.6229
3 E L -4.1397
4 D L 0.0000
5 E L -4.0184
6 D L 0.0000
7 E L -4.7208
8 D L 0.0000
9 E L -5.0453
10 D L 0.0000
11 E L -4.6915
12 D L 0.0000
13 G L -1.9699
14 G L 0.0000
15 K L -1.2119
16 G L 0.0000
17 H L 0.0000
18 F L 0.0000
19 G L -0.6005
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Laboratory of Theory of Biopolymers 2018