| Chain sequence(s) |
A: IVIVKGHE
C: IVIVKGHE B: IVIVKGHE E: IVIVKGHE D: IVIVKGHE G: IVIVKGHE F: IVIVKGHE I: IVIVKGHE H: IVIVKGHE K: IVIVKGHE J: IVIVKGHE L: IVIVKGHE input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:29)
[INFO] Main: Simulation completed successfully. (00:03:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 1.6742 | |
| 2 | V | A | 0.0000 | |
| 3 | I | A | 1.3441 | |
| 4 | V | A | 0.0000 | |
| 5 | K | A | -1.6713 | |
| 6 | G | A | 0.0000 | |
| 7 | H | A | -3.0013 | |
| 8 | E | A | -3.3988 | |
| 1 | I | B | 2.0004 | |
| 2 | V | B | 1.4058 | |
| 3 | I | B | 1.8283 | |
| 4 | V | B | 0.6594 | |
| 5 | K | B | -1.0700 | |
| 6 | G | B | -1.1729 | |
| 7 | H | B | -2.2038 | |
| 8 | E | B | -2.6010 | |
| 1 | I | C | 2.7689 | |
| 2 | V | C | 2.6065 | |
| 3 | I | C | 2.2110 | |
| 4 | V | C | 0.7998 | |
| 5 | K | C | -1.2450 | |
| 6 | G | C | -1.5634 | |
| 7 | H | C | -2.4489 | |
| 8 | E | C | -2.5137 | |
| 1 | I | D | 1.7762 | |
| 2 | V | D | 0.0000 | |
| 3 | I | D | 1.6933 | |
| 4 | V | D | 0.0000 | |
| 5 | K | D | -1.3815 | |
| 6 | G | D | 0.0000 | |
| 7 | H | D | -2.3963 | |
| 8 | E | D | -2.5615 | |
| 1 | I | E | 1.1120 | |
| 2 | V | E | 0.0000 | |
| 3 | I | E | 1.0519 | |
| 4 | V | E | 0.0000 | |
| 5 | K | E | -1.4262 | |
| 6 | G | E | 0.0000 | |
| 7 | H | E | -2.2533 | |
| 8 | E | E | -2.4523 | |
| 1 | I | F | 1.3130 | |
| 2 | V | F | 0.0000 | |
| 3 | I | F | 1.1300 | |
| 4 | V | F | 0.0000 | |
| 5 | K | F | -1.3832 | |
| 6 | G | F | 0.0000 | |
| 7 | H | F | -2.3995 | |
| 8 | E | F | -3.1683 | |
| 1 | I | G | 1.8886 | |
| 2 | V | G | 0.0000 | |
| 3 | I | G | 1.6154 | |
| 4 | V | G | 0.0000 | |
| 5 | K | G | -1.7226 | |
| 6 | G | G | 0.0000 | |
| 7 | H | G | -2.9329 | |
| 8 | E | G | -3.3582 | |
| 1 | I | H | 2.1173 | |
| 2 | V | H | 1.3220 | |
| 3 | I | H | 2.0991 | |
| 4 | V | H | 0.0000 | |
| 5 | K | H | -1.8742 | |
| 6 | G | H | -1.4303 | |
| 7 | H | H | -2.5040 | |
| 8 | E | H | -2.6477 | |
| 1 | I | I | 2.7895 | |
| 2 | V | I | 2.2426 | |
| 3 | I | I | 2.4901 | |
| 4 | V | I | 0.7231 | |
| 5 | K | I | -1.7899 | |
| 6 | G | I | -1.6927 | |
| 7 | H | I | -3.0343 | |
| 8 | E | I | -2.9496 | |
| 1 | I | J | 1.9917 | |
| 2 | V | J | 0.0000 | |
| 3 | I | J | 1.5207 | |
| 4 | V | J | 0.0000 | |
| 5 | K | J | -1.7660 | |
| 6 | G | J | 0.0000 | |
| 7 | H | J | -3.1534 | |
| 8 | E | J | -3.4886 | |
| 1 | I | K | 1.2552 | |
| 2 | V | K | 0.0000 | |
| 3 | I | K | 0.9538 | |
| 4 | V | K | 0.0000 | |
| 5 | K | K | -2.1584 | |
| 6 | G | K | 0.0000 | |
| 7 | H | K | -2.9397 | |
| 8 | E | K | -3.6762 | |
| 1 | I | L | 1.2357 | |
| 2 | V | L | 0.0000 | |
| 3 | I | L | 0.8203 | |
| 4 | V | L | 0.0000 | |
| 5 | K | L | -1.6833 | |
| 6 | G | L | 0.0000 | |
| 7 | H | L | -3.0261 | |
| 8 | E | L | -3.3630 |