Project name: 4a2b2ab0390e231

Status: done

Started: 2026-02-12 15:14:23
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Chain sequence(s) A: IVIVKGHE
C: IVIVKGHE
B: IVIVKGHE
E: IVIVKGHE
D: IVIVKGHE
G: IVIVKGHE
F: IVIVKGHE
I: IVIVKGHE
H: IVIVKGHE
K: IVIVKGHE
J: IVIVKGHE
L: IVIVKGHE
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:32)
Show buried residues

Minimal score value
-3.6762
Maximal score value
2.7895
Average score
-0.4486
Total score value
-43.0634

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 1.6742
2 V A 0.0000
3 I A 1.3441
4 V A 0.0000
5 K A -1.6713
6 G A 0.0000
7 H A -3.0013
8 E A -3.3988
1 I B 2.0004
2 V B 1.4058
3 I B 1.8283
4 V B 0.6594
5 K B -1.0700
6 G B -1.1729
7 H B -2.2038
8 E B -2.6010
1 I C 2.7689
2 V C 2.6065
3 I C 2.2110
4 V C 0.7998
5 K C -1.2450
6 G C -1.5634
7 H C -2.4489
8 E C -2.5137
1 I D 1.7762
2 V D 0.0000
3 I D 1.6933
4 V D 0.0000
5 K D -1.3815
6 G D 0.0000
7 H D -2.3963
8 E D -2.5615
1 I E 1.1120
2 V E 0.0000
3 I E 1.0519
4 V E 0.0000
5 K E -1.4262
6 G E 0.0000
7 H E -2.2533
8 E E -2.4523
1 I F 1.3130
2 V F 0.0000
3 I F 1.1300
4 V F 0.0000
5 K F -1.3832
6 G F 0.0000
7 H F -2.3995
8 E F -3.1683
1 I G 1.8886
2 V G 0.0000
3 I G 1.6154
4 V G 0.0000
5 K G -1.7226
6 G G 0.0000
7 H G -2.9329
8 E G -3.3582
1 I H 2.1173
2 V H 1.3220
3 I H 2.0991
4 V H 0.0000
5 K H -1.8742
6 G H -1.4303
7 H H -2.5040
8 E H -2.6477
1 I I 2.7895
2 V I 2.2426
3 I I 2.4901
4 V I 0.7231
5 K I -1.7899
6 G I -1.6927
7 H I -3.0343
8 E I -2.9496
1 I J 1.9917
2 V J 0.0000
3 I J 1.5207
4 V J 0.0000
5 K J -1.7660
6 G J 0.0000
7 H J -3.1534
8 E J -3.4886
1 I K 1.2552
2 V K 0.0000
3 I K 0.9538
4 V K 0.0000
5 K K -2.1584
6 G K 0.0000
7 H K -2.9397
8 E K -3.6762
1 I L 1.2357
2 V L 0.0000
3 I L 0.8203
4 V L 0.0000
5 K L -1.6833
6 G L 0.0000
7 H L -3.0261
8 E L -3.3630
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Laboratory of Theory of Biopolymers 2018