| Chain sequence(s) |
H: PLVLQESGPGLVKPSEALSLTCTVSGDSINTILYYWSWIRQPPGKGLEWIGYIYYSGSTYGNPSLKSRVTISVNTSKNQFYSKLSSVTAADTAVYYCARVPLVVNPWGQGTLVTVSS
L: PSALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFGTGTKVTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | H | -0.0287 | |
| 2 | L | H | 0.4400 | |
| 3 | V | H | 1.1795 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -0.6906 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.7053 | |
| 8 | G | H | -0.4846 | |
| 9 | P | H | -0.1204 | |
| 11 | G | H | 0.2079 | |
| 12 | L | H | 0.7778 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.3731 | |
| 15 | P | H | -1.1451 | |
| 16 | S | H | -1.3174 | |
| 17 | E | H | -1.9443 | |
| 18 | A | H | -1.2210 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.7925 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.4026 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -0.4988 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -0.2843 | |
| 27 | G | H | -0.3893 | |
| 28 | D | H | -0.6611 | |
| 29 | S | H | -0.7591 | |
| 30 | I | H | 0.0000 | |
| 31 | N | H | -0.1468 | |
| 34 | T | H | 1.0629 | |
| 35 | I | H | 2.7137 | |
| 36 | L | H | 2.6458 | |
| 37 | Y | H | 1.7323 | |
| 38 | Y | H | 1.3118 | |
| 39 | W | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6588 | |
| 45 | P | H | -0.8043 | |
| 46 | P | H | -0.9658 | |
| 47 | G | H | -1.4563 | |
| 48 | K | H | -2.1673 | |
| 49 | G | H | -1.3009 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6661 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | Y | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | 0.8264 | |
| 58 | Y | H | 0.3798 | |
| 59 | S | H | -0.0732 | |
| 63 | G | H | -0.4594 | |
| 64 | S | H | -0.1664 | |
| 65 | T | H | 0.0603 | |
| 66 | Y | H | 0.0939 | |
| 67 | G | H | 0.0000 | |
| 68 | N | H | 0.0000 | |
| 69 | P | H | -0.8779 | |
| 70 | S | H | -0.8290 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -1.5581 | |
| 74 | S | H | -1.0651 | |
| 75 | R | H | -1.0312 | |
| 76 | V | H | -0.7949 | |
| 77 | T | H | -0.5567 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1854 | |
| 80 | V | H | -0.3657 | |
| 81 | N | H | -1.1002 | |
| 82 | T | H | -1.1037 | |
| 83 | S | H | -1.3658 | |
| 84 | K | H | -2.1036 | |
| 85 | N | H | -1.5791 | |
| 86 | Q | H | -1.0885 | |
| 87 | F | H | 0.0000 | |
| 88 | Y | H | -0.0695 | |
| 89 | S | H | 0.0000 | |
| 90 | K | H | -0.9189 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.9169 | |
| 93 | S | H | -0.9875 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.5670 | |
| 96 | A | H | -0.1833 | |
| 97 | A | H | 0.0372 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.2339 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.3414 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.2541 | |
| 107 | V | H | 0.0000 | |
| 108 | P | H | 0.6271 | |
| 109 | L | H | 0.9197 | |
| 114 | V | H | 0.0000 | |
| 115 | V | H | 0.0000 | |
| 116 | N | H | -0.3744 | |
| 117 | P | H | -0.2283 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.5115 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.1355 | |
| 123 | L | H | 0.6888 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3469 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.3293 | |
| 128 | S | H | -0.5078 | |
| 1 | P | L | -0.4941 | |
| 2 | S | L | -0.3692 | |
| 3 | A | L | -0.2004 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.2121 | |
| 6 | Q | L | 0.0000 | |
| 7 | P | L | -0.4227 | |
| 8 | P | L | -0.6615 | |
| 9 | S | L | -0.7514 | |
| 11 | A | L | -0.4677 | |
| 12 | S | L | 0.0496 | |
| 13 | G | L | 0.1613 | |
| 14 | S | L | 0.6741 | |
| 15 | L | L | 1.0637 | |
| 16 | G | L | -0.4304 | |
| 17 | Q | L | -1.0515 | |
| 18 | S | L | -0.7729 | |
| 19 | V | L | -0.3792 | |
| 20 | T | L | -0.1333 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.2280 | |
| 23 | C | L | 0.0000 | |
| 24 | T | L | -0.4750 | |
| 25 | G | L | -0.6008 | |
| 26 | T | L | -0.6929 | |
| 27 | S | L | -0.8395 | |
| 28 | S | L | -0.6655 | |
| 29 | D | L | 0.0000 | |
| 30 | V | L | 0.0000 | |
| 31 | G | L | -1.1338 | |
| 35 | G | L | -0.8980 | |
| 36 | Y | L | -0.4597 | |
| 37 | N | L | -1.0948 | |
| 38 | Y | L | 0.1586 | |
| 39 | V | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | H | L | -1.6023 | |
| 46 | A | L | -1.0856 | |
| 47 | G | L | -1.4532 | |
| 48 | K | L | -2.3548 | |
| 49 | A | L | -1.4745 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1059 | |
| 52 | V | L | 0.0000 | |
| 53 | I | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.7118 | |
| 56 | E | L | -0.9951 | |
| 57 | V | L | -1.2077 | |
| 65 | N | L | -2.1940 | |
| 66 | K | L | -2.2905 | |
| 67 | R | L | -2.3243 | |
| 68 | P | L | -1.1735 | |
| 69 | S | L | -0.8037 | |
| 70 | G | L | -0.9180 | |
| 71 | V | L | -1.1524 | |
| 72 | P | L | -1.3684 | |
| 74 | D | L | -2.3421 | |
| 75 | R | L | -1.4494 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.4079 | |
| 78 | G | L | -1.2200 | |
| 79 | S | L | -1.1113 | |
| 80 | K | L | -1.2417 | |
| 83 | S | L | -0.8407 | |
| 84 | G | L | -1.1102 | |
| 85 | N | L | -1.1654 | |
| 86 | T | L | -0.7698 | |
| 87 | A | L | 0.0000 | |
| 88 | S | L | -0.4480 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.3457 | |
| 91 | V | L | 0.0000 | |
| 92 | S | L | -0.9846 | |
| 93 | G | L | -0.9759 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.9990 | |
| 96 | A | L | -0.7178 | |
| 97 | E | L | -1.9705 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -1.6146 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -1.2186 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | S | L | 0.0000 | |
| 106 | S | L | 0.0000 | |
| 107 | Y | L | 0.0602 | |
| 108 | E | L | -0.4481 | |
| 109 | G | L | -0.5699 | |
| 113 | S | L | -0.4760 | |
| 114 | D | L | -0.4736 | |
| 115 | N | L | 0.0000 | |
| 116 | F | L | 0.1083 | |
| 117 | V | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | T | L | -0.5918 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.2939 | |
| 124 | V | L | 0.0000 | |
| 125 | T | L | -0.1944 | |
| 126 | V | L | 0.4097 | |
| 127 | L | L | 1.6221 |