Project name: 4a3033c8cc24ecb

Status: done

Started: 2026-03-03 03:24:03
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Chain sequence(s) H: PLVLQESGPGLVKPSEALSLTCTVSGDSINTILYYWSWIRQPPGKGLEWIGYIYYSGSTYGNPSLKSRVTISVNTSKNQFYSKLSSVTAADTAVYYCARVPLVVNPWGQGTLVTVSS
L: PSALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFGTGTKVTVL
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:19)
Show buried residues

Minimal score value
-2.3548
Maximal score value
2.7137
Average score
-0.3809
Total score value
-86.4605

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 P H -0.0287
2 L H 0.4400
3 V H 1.1795
4 L H 0.0000
5 Q H -0.6906
6 E H 0.0000
7 S H -0.7053
8 G H -0.4846
9 P H -0.1204
11 G H 0.2079
12 L H 0.7778
13 V H 0.0000
14 K H -1.3731
15 P H -1.1451
16 S H -1.3174
17 E H -1.9443
18 A H -1.2210
19 L H 0.0000
20 S H -0.7925
21 L H 0.0000
22 T H -0.4026
23 C H 0.0000
24 T H -0.4988
25 V H 0.0000
26 S H -0.2843
27 G H -0.3893
28 D H -0.6611
29 S H -0.7591
30 I H 0.0000
31 N H -0.1468
34 T H 1.0629
35 I H 2.7137
36 L H 2.6458
37 Y H 1.7323
38 Y H 1.3118
39 W H 0.0000
40 S H 0.0000
41 W H 0.0000
42 I H 0.0000
43 R H 0.0000
44 Q H -0.6588
45 P H -0.8043
46 P H -0.9658
47 G H -1.4563
48 K H -2.1673
49 G H -1.3009
50 L H 0.0000
51 E H -0.6661
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 Y H 0.0000
56 I H 0.0000
57 Y H 0.8264
58 Y H 0.3798
59 S H -0.0732
63 G H -0.4594
64 S H -0.1664
65 T H 0.0603
66 Y H 0.0939
67 G H 0.0000
68 N H 0.0000
69 P H -0.8779
70 S H -0.8290
71 L H 0.0000
72 K H -1.5581
74 S H -1.0651
75 R H -1.0312
76 V H -0.7949
77 T H -0.5567
78 I H 0.0000
79 S H -0.1854
80 V H -0.3657
81 N H -1.1002
82 T H -1.1037
83 S H -1.3658
84 K H -2.1036
85 N H -1.5791
86 Q H -1.0885
87 F H 0.0000
88 Y H -0.0695
89 S H 0.0000
90 K H -0.9189
91 L H 0.0000
92 S H -0.9169
93 S H -0.9875
94 V H 0.0000
95 T H -0.5670
96 A H -0.1833
97 A H 0.0372
98 D H 0.0000
99 T H 0.2339
100 A H 0.0000
101 V H 0.3414
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.2541
107 V H 0.0000
108 P H 0.6271
109 L H 0.9197
114 V H 0.0000
115 V H 0.0000
116 N H -0.3744
117 P H -0.2283
118 W H 0.0000
119 G H 0.0000
120 Q H -1.5115
121 G H 0.0000
122 T H -0.1355
123 L H 0.6888
124 V H 0.0000
125 T H 0.3469
126 V H 0.0000
127 S H -0.3293
128 S H -0.5078
1 P L -0.4941
2 S L -0.3692
3 A L -0.2004
4 L L 0.0000
5 T L -0.2121
6 Q L 0.0000
7 P L -0.4227
8 P L -0.6615
9 S L -0.7514
11 A L -0.4677
12 S L 0.0496
13 G L 0.1613
14 S L 0.6741
15 L L 1.0637
16 G L -0.4304
17 Q L -1.0515
18 S L -0.7729
19 V L -0.3792
20 T L -0.1333
21 I L 0.0000
22 S L -0.2280
23 C L 0.0000
24 T L -0.4750
25 G L -0.6008
26 T L -0.6929
27 S L -0.8395
28 S L -0.6655
29 D L 0.0000
30 V L 0.0000
31 G L -1.1338
35 G L -0.8980
36 Y L -0.4597
37 N L -1.0948
38 Y L 0.1586
39 V L 0.0000
40 S L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 H L -1.6023
46 A L -1.0856
47 G L -1.4532
48 K L -2.3548
49 A L -1.4745
50 P L 0.0000
51 K L -1.1059
52 V L 0.0000
53 I L 0.0000
54 I L 0.0000
55 Y L -0.7118
56 E L -0.9951
57 V L -1.2077
65 N L -2.1940
66 K L -2.2905
67 R L -2.3243
68 P L -1.1735
69 S L -0.8037
70 G L -0.9180
71 V L -1.1524
72 P L -1.3684
74 D L -2.3421
75 R L -1.4494
76 F L 0.0000
77 S L -1.4079
78 G L -1.2200
79 S L -1.1113
80 K L -1.2417
83 S L -0.8407
84 G L -1.1102
85 N L -1.1654
86 T L -0.7698
87 A L 0.0000
88 S L -0.4480
89 L L 0.0000
90 T L -0.3457
91 V L 0.0000
92 S L -0.9846
93 G L -0.9759
94 L L 0.0000
95 Q L -0.9990
96 A L -0.7178
97 E L -1.9705
98 D L 0.0000
99 E L -1.6146
100 A L 0.0000
101 D L -1.2186
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 S L 0.0000
106 S L 0.0000
107 Y L 0.0602
108 E L -0.4481
109 G L -0.5699
113 S L -0.4760
114 D L -0.4736
115 N L 0.0000
116 F L 0.1083
117 V L 0.0000
118 F L 0.0000
119 G L 0.0000
120 T L -0.5918
121 G L 0.0000
122 T L 0.0000
123 K L -1.2939
124 V L 0.0000
125 T L -0.1944
126 V L 0.4097
127 L L 1.6221
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Laboratory of Theory of Biopolymers 2018