| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAGGDYVGYYVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTTYNGPWIYGYEEIPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6342 | |
| 2 | S | A | 0.1970 | |
| 3 | D | A | -0.8770 | |
| 4 | V | A | -0.7820 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.4895 | |
| 7 | D | A | -3.0122 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.0199 | |
| 10 | V | A | 0.1039 | |
| 11 | V | A | 1.5479 | |
| 12 | A | A | 0.9055 | |
| 13 | A | A | 0.3260 | |
| 14 | T | A | -0.3387 | |
| 15 | P | A | -1.1169 | |
| 16 | T | A | -0.9962 | |
| 17 | S | A | -0.5247 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7666 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.0158 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.7705 | |
| 24 | A | A | -1.7471 | |
| 25 | G | A | -1.2884 | |
| 26 | G | A | -0.6726 | |
| 27 | D | A | -0.7422 | |
| 28 | Y | A | 1.5086 | |
| 29 | V | A | 1.8377 | |
| 30 | G | A | 0.7779 | |
| 31 | Y | A | 0.7338 | |
| 32 | Y | A | 0.6668 | |
| 33 | V | A | -0.1144 | |
| 34 | R | A | -0.0672 | |
| 35 | Y | A | -0.0697 | |
| 36 | Y | A | 0.0000 | |
| 37 | R | A | -0.7697 | |
| 38 | I | A | 0.0000 | |
| 39 | T | A | 0.0000 | |
| 40 | Y | A | -0.4572 | |
| 41 | G | A | -0.7675 | |
| 42 | E | A | -1.6556 | |
| 43 | T | A | -1.2817 | |
| 44 | G | A | -1.2557 | |
| 45 | G | A | -1.4490 | |
| 46 | N | A | -1.5734 | |
| 47 | S | A | -0.9382 | |
| 48 | P | A | -0.4330 | |
| 49 | V | A | 0.2406 | |
| 50 | Q | A | -1.2243 | |
| 51 | E | A | -1.8297 | |
| 52 | F | A | -0.7120 | |
| 53 | T | A | -0.1745 | |
| 54 | V | A | -0.3148 | |
| 55 | P | A | -0.6652 | |
| 56 | G | A | -0.5819 | |
| 57 | S | A | -0.9469 | |
| 58 | K | A | -1.7824 | |
| 59 | S | A | -1.2498 | |
| 60 | T | A | -0.6709 | |
| 61 | A | A | 0.0000 | |
| 62 | T | A | 0.2618 | |
| 63 | I | A | 0.0000 | |
| 64 | S | A | -0.6627 | |
| 65 | G | A | -1.0324 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -2.3735 | |
| 68 | P | A | -1.6634 | |
| 69 | G | A | -1.4477 | |
| 70 | V | A | -1.4224 | |
| 71 | D | A | -2.0783 | |
| 72 | Y | A | 0.0000 | |
| 73 | T | A | -0.7918 | |
| 74 | I | A | 0.0000 | |
| 75 | T | A | 0.0000 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | -0.3469 | |
| 78 | A | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | T | A | 0.0000 | |
| 81 | T | A | 0.0000 | |
| 82 | Y | A | 1.1721 | |
| 83 | N | A | 0.2480 | |
| 84 | G | A | 0.7658 | |
| 85 | P | A | 0.7202 | |
| 86 | W | A | 2.0918 | |
| 87 | I | A | 3.0353 | |
| 88 | Y | A | 2.3063 | |
| 89 | G | A | 1.4428 | |
| 90 | Y | A | 0.7009 | |
| 91 | E | A | -1.1623 | |
| 92 | E | A | -1.6801 | |
| 93 | I | A | -0.7626 | |
| 94 | P | A | -0.5770 | |
| 95 | I | A | -0.0522 | |
| 96 | S | A | -0.6382 | |
| 97 | I | A | -0.7344 | |
| 98 | N | A | -1.7219 | |
| 99 | Y | A | -1.4560 | |
| 100 | R | A | -2.5126 | |
| 101 | T | A | -1.4947 |