Project name: query_structure

Status: done

Started: 2026-03-16 21:42:29
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYAEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYKVWIHGVKGGASSPPLIARFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:57)
Show buried residues

Minimal score value
-3.0478
Maximal score value
1.2079
Average score
-0.7642
Total score value
-68.7784

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0630
2 L A 0.3992
3 P A -0.2072
4 A A -0.5206
5 P A 0.0000
6 K A -1.9050
7 N A -1.3705
8 L A -0.0595
9 V A 0.9136
10 V A 0.0606
11 S A -0.5852
12 R A -1.9870
13 V A -0.9913
14 T A -1.7766
15 E A -3.0451
16 D A -2.6843
17 S A -2.0200
18 A A 0.0000
19 R A -1.1253
20 L A 0.0000
21 S A -0.3495
22 W A 0.0000
23 T A -1.3174
24 A A -1.4359
25 P A -1.4009
26 D A -2.2798
27 A A -1.4548
28 A A -1.2087
29 F A 0.0000
30 D A -2.5982
31 S A 0.0000
32 F A 0.0000
33 N A -0.7521
34 I A 0.0000
35 A A 0.0000
36 Y A 0.0960
37 A A 0.0000
38 E A -1.5613
39 P A -1.0041
40 G A -0.0293
41 I A 1.2079
42 G A -0.2472
43 G A -0.9226
44 E A -1.4612
45 A A -0.3704
46 I A 0.7962
47 W A 0.9314
48 L A 0.0347
49 R A -1.6396
50 V A 0.0000
51 P A -1.5527
52 G A 0.0000
53 S A -1.6210
54 E A -1.7070
55 R A -1.1478
56 S A -0.5863
57 Y A -0.6281
58 D A -1.5043
59 L A 0.0000
60 T A -1.2930
61 G A -1.4850
62 L A 0.0000
63 K A -3.0478
64 P A -2.6661
65 G A -1.9315
66 T A -2.0897
67 E A -2.5099
68 Y A 0.0000
69 K A -1.3343
70 V A 0.0000
71 W A 0.5379
72 I A 0.0000
73 H A -0.3678
74 G A 0.0000
75 V A -1.3652
76 K A -1.8688
77 G A -1.4813
78 G A -1.1842
79 A A -0.6571
80 S A -0.3839
81 S A 0.0000
82 P A 0.1510
83 P A 0.0671
84 L A 0.3699
85 I A 0.9097
86 A A -0.0326
87 R A -1.8343
88 F A 0.0000
89 T A -1.7407
90 T A -1.9856
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Laboratory of Theory of Biopolymers 2018