| Chain sequence(s) |
A: CGETCVGGTCNTPGCTCSWDKCTRNGLPV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.2127 | |
| 2 | G | A | -0.1175 | |
| 3 | E | A | -1.0756 | |
| 4 | T | A | -1.0782 | |
| 5 | C | A | 0.0000 | |
| 6 | V | A | 0.9656 | |
| 7 | G | A | -0.1688 | |
| 8 | G | A | -0.4466 | |
| 9 | T | A | -0.4852 | |
| 10 | C | A | -0.9424 | |
| 11 | N | A | -1.3958 | |
| 12 | T | A | -0.9556 | |
| 13 | P | A | -0.8574 | |
| 14 | G | A | -1.0380 | |
| 15 | C | A | 0.0000 | |
| 16 | T | A | -1.0390 | |
| 17 | C | A | -0.8073 | |
| 18 | S | A | -0.7273 | |
| 19 | W | A | -0.0062 | |
| 20 | D | A | -1.5389 | |
| 21 | K | A | -1.6201 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -0.3292 | |
| 24 | R | A | -0.6261 | |
| 25 | N | A | -1.1808 | |
| 26 | G | A | -0.4710 | |
| 27 | L | A | 0.8526 | |
| 28 | P | A | 0.4573 | |
| 29 | V | A | 1.4770 |