Project name: query_structure

Status: done

Started: 2026-03-16 22:59:23
Settings
Chain sequence(s) A: CGETCVGGTCNTPGCTCSWDKCTRNGLPV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:13)
Show buried residues

Minimal score value
-1.6201
Maximal score value
1.477
Average score
-0.4463
Total score value
-12.9418

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.2127
2 G A -0.1175
3 E A -1.0756
4 T A -1.0782
5 C A 0.0000
6 V A 0.9656
7 G A -0.1688
8 G A -0.4466
9 T A -0.4852
10 C A -0.9424
11 N A -1.3958
12 T A -0.9556
13 P A -0.8574
14 G A -1.0380
15 C A 0.0000
16 T A -1.0390
17 C A -0.8073
18 S A -0.7273
19 W A -0.0062
20 D A -1.5389
21 K A -1.6201
22 C A 0.0000
23 T A -0.3292
24 R A -0.6261
25 N A -1.1808
26 G A -0.4710
27 L A 0.8526
28 P A 0.4573
29 V A 1.4770
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Laboratory of Theory of Biopolymers 2018