| Chain sequence(s) |
A: GTCSTLGCTCKPLRCKAPRMVRCGETCGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7246 | |
| 2 | T | A | -0.4216 | |
| 3 | C | A | -0.6617 | |
| 4 | S | A | -0.0496 | |
| 5 | T | A | 0.4650 | |
| 6 | L | A | 1.4626 | |
| 7 | G | A | 0.2984 | |
| 8 | C | A | 0.0195 | |
| 9 | T | A | -0.8531 | |
| 10 | C | A | -0.9965 | |
| 11 | K | A | -1.6239 | |
| 12 | P | A | -0.6633 | |
| 13 | L | A | -0.0808 | |
| 14 | R | A | -2.0307 | |
| 15 | C | A | -1.6916 | |
| 16 | K | A | -2.1669 | |
| 17 | A | A | -0.9843 | |
| 18 | P | A | -0.9390 | |
| 19 | R | A | -1.4952 | |
| 20 | M | A | 0.4899 | |
| 21 | V | A | 0.7190 | |
| 22 | R | A | -1.2215 | |
| 23 | C | A | -1.0576 | |
| 24 | G | A | -1.2916 | |
| 25 | E | A | -1.9534 | |
| 26 | T | A | -1.0409 | |
| 27 | C | A | -0.9530 | |
| 28 | G | A | -0.9251 | |
| 29 | G | A | -0.5279 |