| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLYNKLGDTENPTAPLHCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFHVRCGPDGHPLPDAPPPSPLYVPPPPTSPFAVPPPRDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPALNVYDPANFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9416 | |
| 2 | L | A | 1.9623 | |
| 3 | P | A | 0.8354 | |
| 4 | P | A | 0.3750 | |
| 5 | T | A | 0.1243 | |
| 6 | T | A | 0.1280 | |
| 7 | P | A | 0.1896 | |
| 8 | V | A | 1.2118 | |
| 9 | A | A | 0.0930 | |
| 10 | K | A | -1.0149 | |
| 11 | V | A | -0.1517 | |
| 12 | Q | A | -1.3798 | |
| 13 | S | A | -1.5412 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4102 | |
| 16 | E | A | -2.4317 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4589 | |
| 20 | P | A | 0.1284 | |
| 21 | T | A | 0.1600 | |
| 22 | S | A | -0.0963 | |
| 23 | L | A | 0.1114 | |
| 24 | F | A | -0.0343 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2836 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8928 | |
| 31 | R | A | -2.6760 | |
| 32 | L | A | -0.7919 | |
| 33 | L | A | 1.1674 | |
| 34 | T | A | 1.3744 | |
| 35 | V | A | 1.8355 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2235 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6225 | |
| 40 | K | A | -1.6323 | |
| 41 | D | A | -0.9125 | |
| 42 | I | A | 0.8306 | |
| 43 | V | A | 0.8927 | |
| 44 | K | A | -1.4190 | |
| 45 | D | A | -2.4408 | |
| 46 | G | A | -1.4796 | |
| 47 | K | A | -1.1338 | |
| 48 | V | A | 1.3527 | |
| 49 | V | A | 1.9449 | |
| 50 | V | A | 1.2344 | |
| 51 | P | A | 0.4322 | |
| 52 | K | A | -0.6438 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1515 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3953 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2672 | |
| 70 | K | A | -1.7837 | |
| 71 | F | A | -0.6303 | |
| 72 | A | A | -0.5739 | |
| 73 | L | A | -0.8645 | |
| 74 | P | A | -1.2043 | |
| 75 | Q | A | -2.5100 | |
| 76 | K | A | -3.1096 | |
| 77 | D | A | -2.9933 | |
| 78 | F | A | -1.6564 | |
| 79 | Y | A | -1.8991 | |
| 80 | D | A | -2.6963 | |
| 81 | P | A | -2.3668 | |
| 82 | E | A | -3.0575 | |
| 83 | K | A | -3.3936 | |
| 84 | E | A | -2.4600 | |
| 85 | R | A | -1.2986 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6674 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9559 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3527 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6850 | |
| 99 | G | A | -0.5202 | |
| 100 | P | A | -0.3787 | |
| 101 | L | A | 0.0960 | |
| 102 | G | A | -0.2038 | |
| 103 | K | A | -0.6877 | |
| 104 | G | A | -0.5088 | |
| 105 | S | A | -0.5310 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1340 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4539 | |
| 110 | L | A | 0.3624 | |
| 111 | Y | A | 0.0000 | |
| 112 | N | A | -1.0883 | |
| 113 | K | A | -0.2115 | |
| 114 | L | A | -0.8057 | |
| 115 | G | A | -0.7868 | |
| 116 | D | A | -1.2441 | |
| 117 | T | A | -0.9548 | |
| 118 | E | A | -1.8775 | |
| 119 | N | A | -2.0319 | |
| 120 | P | A | -1.3909 | |
| 121 | T | A | -0.7139 | |
| 122 | A | A | -0.4521 | |
| 123 | P | A | -0.1030 | |
| 124 | L | A | -0.0702 | |
| 125 | H | A | -0.5403 | |
| 126 | C | A | -0.8130 | |
| 127 | G | A | -1.2875 | |
| 128 | A | A | -1.1914 | |
| 129 | D | A | -2.1686 | |
| 130 | D | A | -1.7665 | |
| 131 | R | A | -1.1041 | |
| 132 | V | A | 0.2843 | |
| 133 | A | A | 0.4845 | |
| 134 | F | A | 0.3080 | |
| 135 | S | A | -0.0797 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6491 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2478 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5663 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1788 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1748 | |
| 157 | D | A | 0.3568 | |
| 158 | L | A | 0.8271 | |
| 159 | A | A | 0.1916 | |
| 160 | E | A | -1.4446 | |
| 161 | P | A | -0.2017 | |
| 162 | C | A | 0.1863 | |
| 163 | P | A | -0.1773 | |
| 164 | G | A | -0.0897 | |
| 165 | L | A | 0.5659 | |
| 166 | P | A | -0.1292 | |
| 167 | P | A | -0.3463 | |
| 168 | G | A | -0.4540 | |
| 169 | A | A | -0.0345 | |
| 170 | C | A | 0.6523 | |
| 171 | P | A | 0.5336 | |
| 172 | P | A | 0.8584 | |
| 173 | I | A | 2.0204 | |
| 174 | Q | A | 0.8686 | |
| 175 | L | A | 1.5042 | |
| 176 | V | A | 0.8733 | |
| 177 | N | A | -0.2837 | |
| 178 | S | A | 0.0321 | |
| 179 | V | A | 0.4264 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3810 | |
| 182 | D | A | 0.0799 | |
| 183 | G | A | -0.1606 | |
| 184 | D | A | -0.5132 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1110 | |
| 190 | F | A | 0.0735 | |
| 191 | G | A | -0.1004 | |
| 192 | N | A | -0.2337 | |
| 193 | M | A | -0.0770 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3754 | |
| 197 | E | A | -2.5935 | |
| 198 | L | A | -1.2230 | |
| 199 | Q | A | -2.5702 | |
| 200 | Q | A | -3.3219 | |
| 201 | D | A | -3.5904 | |
| 202 | R | A | -3.3313 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2013 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3398 | |
| 211 | S | A | -1.8650 | |
| 212 | T | A | -1.3798 | |
| 213 | R | A | -1.9744 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1488 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3796 | |
| 220 | L | A | 0.6131 | |
| 221 | K | A | -1.0944 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8101 | |
| 224 | N | A | -1.4877 | |
| 225 | E | A | -1.2300 | |
| 226 | A | A | -0.5996 | |
| 227 | Y | A | -0.3600 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6752 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0726 | |
| 234 | F | A | 0.2537 | |
| 235 | G | A | -0.8224 | |
| 236 | R | A | -2.6045 | |
| 237 | R | A | -2.8915 | |
| 238 | E | A | -2.1492 | |
| 239 | Q | A | -0.2175 | |
| 240 | V | A | 1.4406 | |
| 241 | Y | A | 1.1671 | |
| 242 | A | A | 0.3092 | |
| 243 | R | A | -0.7662 | |
| 244 | H | A | -0.9354 | |
| 245 | F | A | 0.0399 | |
| 246 | H | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7054 | |
| 249 | C | A | -1.0348 | |
| 250 | G | A | -1.1066 | |
| 251 | P | A | -1.1420 | |
| 252 | D | A | -1.6695 | |
| 253 | G | A | -1.4166 | |
| 254 | H | A | -1.5796 | |
| 255 | P | A | -1.2586 | |
| 256 | L | A | -0.3681 | |
| 257 | P | A | -0.8558 | |
| 258 | D | A | -1.9208 | |
| 259 | A | A | -0.5338 | |
| 260 | P | A | -0.7080 | |
| 261 | P | A | -0.2011 | |
| 262 | P | A | 0.0753 | |
| 263 | S | A | 0.3067 | |
| 264 | P | A | 0.7168 | |
| 265 | L | A | 1.9297 | |
| 266 | Y | A | 1.8356 | |
| 267 | V | A | 1.9804 | |
| 268 | P | A | 0.9267 | |
| 269 | P | A | 0.6874 | |
| 270 | P | A | -0.0773 | |
| 271 | P | A | -0.0229 | |
| 272 | T | A | 0.0535 | |
| 273 | S | A | 0.3952 | |
| 274 | P | A | 0.5832 | |
| 275 | F | A | 1.6576 | |
| 276 | A | A | 1.2553 | |
| 277 | V | A | 1.9727 | |
| 278 | P | A | 0.9621 | |
| 279 | P | A | 0.0226 | |
| 280 | P | A | -0.5692 | |
| 281 | R | A | -0.9474 | |
| 282 | D | A | -1.2494 | |
| 283 | Y | A | 0.6609 | |
| 284 | F | A | 0.6031 | |
| 285 | G | A | 0.1905 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9366 | |
| 291 | L | A | 1.6023 | |
| 292 | V | A | 0.6247 | |
| 293 | S | A | -0.1437 | |
| 294 | S | A | -0.9496 | |
| 295 | D | A | -1.8421 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1128 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6371 | |
| 301 | R | A | -1.8350 | |
| 302 | P | A | -0.9414 | |
| 303 | F | A | -0.1864 | |
| 304 | W | A | -0.5559 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0848 | |
| 307 | R | A | -2.8334 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2642 | |
| 310 | G | A | -1.2285 | |
| 311 | N | A | -1.2682 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8379 | |
| 319 | N | A | -0.9449 | |
| 320 | E | A | -1.0437 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3257 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0934 | |
| 333 | N | A | 0.5512 | |
| 334 | F | A | 1.7577 | |
| 335 | T | A | 0.8742 | |
| 336 | I | A | 0.4037 | |
| 337 | S | A | -0.9299 | |
| 338 | Q | A | -1.5876 | |
| 339 | Q | A | -0.9055 | |
| 340 | L | A | 0.5989 | |
| 341 | S | A | 0.2906 | |
| 342 | T | A | 0.0443 | |
| 343 | P | A | -0.2282 | |
| 344 | A | A | -0.0140 | |
| 345 | L | A | 0.4871 | |
| 346 | N | A | -0.0045 | |
| 347 | V | A | 1.7064 | |
| 348 | Y | A | 1.5415 | |
| 349 | D | A | -0.0124 | |
| 350 | P | A | -0.5514 | |
| 351 | A | A | -0.2567 | |
| 352 | N | A | -0.0930 | |
| 353 | F | A | -0.7961 | |
| 354 | K | A | -1.8808 | |
| 355 | N | A | -1.7827 | |
| 356 | Y | A | -0.1411 | |
| 357 | L | A | 0.6432 | |
| 358 | R | A | 0.9647 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3966 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0731 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0314 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6854 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3018 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3040 | |
| 376 | L | A | -1.6945 | |
| 377 | D | A | -1.9608 | |
| 378 | P | A | -1.0246 | |
| 379 | G | A | -1.0075 | |
| 380 | V | A | -0.9247 | |
| 381 | L | A | -0.5242 | |
| 382 | A | A | -0.6538 | |
| 383 | H | A | -0.8037 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4270 | |
| 386 | T | A | -0.5591 | |
| 387 | M | A | -0.3025 | |
| 388 | N | A | -0.8663 | |
| 389 | P | A | -1.2544 | |
| 390 | T | A | -1.4666 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4706 | |
| 393 | E | A | -2.8390 | |
| 394 | N | A | -2.2785 | |
| 395 | W | A | -1.4207 | |
| 396 | N | A | -1.1855 | |
| 397 | L | A | -0.2326 | |
| 398 | G | A | 0.4752 | |
| 399 | F | A | 2.4091 | |
| 400 | V | A | 1.8307 | |
| 401 | P | A | -0.1568 | |
| 402 | P | A | -1.8534 | |
| 403 | K | A | -3.2468 | |
| 404 | E | A | -3.8037 | |
| 405 | R | A | -3.9674 | |
| 406 | E | A | -3.8245 | |
| 407 | D | A | -2.8938 | |
| 408 | P | A | -1.7762 | |
| 409 | Y | A | -0.9898 | |
| 410 | K | A | -2.1195 | |
| 411 | G | A | -0.6388 | |
| 412 | L | A | 0.6727 | |
| 413 | I | A | 1.5854 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3992 | |
| 416 | E | A | -1.7038 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9525 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0492 | |
| 421 | E | A | -2.7776 | |
| 422 | R | A | -2.6273 | |
| 423 | F | A | -1.2790 | |
| 424 | S | A | -1.4736 | |
| 425 | Q | A | -1.8714 | |
| 426 | D | A | -2.9082 | |
| 427 | L | A | -1.9932 | |
| 428 | D | A | -2.7827 | |
| 429 | Q | A | -2.6208 | |
| 430 | F | A | -1.4227 | |
| 431 | A | A | -0.8955 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5737 | |
| 435 | K | A | -0.7129 | |
| 436 | F | A | 0.1428 | |
| 437 | L | A | 1.0305 | |
| 438 | Y | A | 0.8261 | |
| 439 | Q | A | -0.2746 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine