Project name: 4af213c7abc4fe0

Status: done

Started: 2026-05-20 10:59:02
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Chain sequence(s) A: FFKGHGF
C: FFKGHGF
B: FFKGHGF
E: FFKGHGF
D: FFKGHGF
G: FFKGHGF
F: FFKGHGF
I: FFKGHGF
H: FFKGHGF
K: FFKGHGF
J: FFKGHGF
M: FFKGHGF
L: FFKGHGF
O: FFKGHGF
N: FFKGHGF
Q: FFKGHGF
P: FFKGHGF
S: FFKGHGF
R: FFKGHGF
T: FFKGHGF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:09:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:46)
Show buried residues

Minimal score value
-2.2783
Maximal score value
3.485
Average score
0.5047
Total score value
70.6531

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 2.9679
2 F A 0.0000
3 K A -1.2243
4 G A 0.0000
5 H A -0.5322
6 G A 0.0000
7 F A 2.5772
1 F B 2.1579
2 F B 0.0000
3 K B -1.1558
4 G B 0.0000
5 H B -0.4031
6 G B 0.0000
7 F B 2.6004
1 F C 2.3876
2 F C 0.0000
3 K C -1.1627
4 G C 0.0000
5 H C -0.4179
6 G C 0.0000
7 F C 2.5740
1 F D 1.9436
2 F D 0.0000
3 K D -1.2604
4 G D 0.0000
5 H D -0.3372
6 G D 0.0000
7 F D 2.6011
1 F E 2.0241
2 F E 0.0000
3 K E -1.2213
4 G E 0.0000
5 H E -0.4395
6 G E 0.0000
7 F E 2.6566
1 F F 2.3011
2 F F 0.0000
3 K F -1.2742
4 G F 0.0000
5 H F -0.5198
6 G F 0.0000
7 F F 2.8673
1 F G 2.6202
2 F G 0.0000
3 K G -1.1727
4 G G 0.0000
5 H G -0.6128
6 G G 0.0000
7 F G 3.0447
1 F H 2.9595
2 F H 1.2440
3 K H -1.0915
4 G H 0.0000
5 H H -0.9824
6 G H 0.7804
7 F H 2.9227
1 F I 2.8615
2 F I 0.0000
3 K I -2.0097
4 G I -2.0517
5 H I -0.9020
6 G I 0.0000
7 F I 3.2734
1 F J 2.4987
2 F J 0.0000
3 K J -1.7559
4 G J 0.0000
5 H J -0.7027
6 G J 0.0000
7 F J 2.9578
1 F K 2.1080
2 F K 0.0000
3 K K -1.7657
4 G K 0.0000
5 H K -0.6028
6 G K 0.0000
7 F K 2.6278
1 F L 2.4529
2 F L 0.0000
3 K L -1.3847
4 G L 0.0000
5 H L -0.4635
6 G L 0.0000
7 F L 2.5993
1 F M 2.2328
2 F M 0.0000
3 K M -1.1693
4 G M 0.0000
5 H M -0.3156
6 G M 0.0000
7 F M 2.6019
1 F N 1.8732
2 F N 0.0000
3 K N -1.3167
4 G N 0.0000
5 H N -0.3478
6 G N 0.0000
7 F N 2.6516
1 F O 2.1864
2 F O 0.0000
3 K O -1.0909
4 G O 0.0000
5 H O -0.5479
6 G O 0.0000
7 F O 2.7373
1 F P 2.3779
2 F P 0.0000
3 K P -0.8778
4 G P 0.0000
5 H P -0.5457
6 G P 0.0000
7 F P 3.2913
1 F Q 2.9535
2 F Q 0.0000
3 K Q -0.7946
4 G Q 0.0000
5 H Q -0.7977
6 G Q 0.0000
7 F Q 3.4536
1 F R 3.0659
2 F R 1.5397
3 K R -1.1362
4 G R -2.1480
5 H R -1.1886
6 G R 1.0479
7 F R 3.0588
1 F S 3.3223
2 F S 1.0615
3 K S -1.7113
4 G S -2.2783
5 H S -0.9693
6 G S 1.4596
7 F S 3.4057
1 F T 3.4850
2 F T 0.0000
3 K T -1.3218
4 G T 0.0000
5 H T -0.8011
6 G T 0.0000
7 F T 3.0426
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Laboratory of Theory of Biopolymers 2018