| Chain sequence(s) |
A: AEAEAKAKAEAEAKAK
C: AEAEAKAKAEAEAKAK B: AEAEAKAKAEAEAKAK E: AEAEAKAKAEAEAKAK D: AEAEAKAKAEAEAKAK G: AEAEAKAKAEAEAKAK F: AEAEAKAKAEAEAKAK I: AEAEAKAKAEAEAKAK H: AEAEAKAKAEAEAKAK K: AEAEAKAKAEAEAKAK J: AEAEAKAKAEAEAKAK M: AEAEAKAKAEAEAKAK L: AEAEAKAKAEAEAKAK O: AEAEAKAKAEAEAKAK N: AEAEAKAKAEAEAKAK Q: AEAEAKAKAEAEAKAK P: AEAEAKAKAEAEAKAK S: AEAEAKAKAEAEAKAK R: AEAEAKAKAEAEAKAK T: AEAEAKAKAEAEAKAK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:26:41)
[INFO] Main: Simulation completed successfully. (00:26:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -1.5421 | |
| 2 | E | A | -2.3202 | |
| 3 | A | A | -1.8513 | |
| 4 | E | A | -2.1669 | |
| 5 | A | A | -2.5083 | |
| 6 | K | A | -2.7800 | |
| 7 | A | A | -2.2310 | |
| 8 | K | A | 0.0000 | |
| 9 | A | A | -2.0316 | |
| 10 | E | A | -3.0672 | |
| 11 | A | A | -2.9591 | |
| 12 | E | A | -2.8141 | |
| 13 | A | A | -2.2512 | |
| 14 | K | A | -3.2545 | |
| 15 | A | A | -3.0491 | |
| 16 | K | A | -2.5882 | |
| 1 | A | B | -1.4659 | |
| 2 | E | B | -2.4168 | |
| 3 | A | B | -2.0001 | |
| 4 | E | B | -2.0800 | |
| 5 | A | B | -1.9446 | |
| 6 | K | B | -2.7645 | |
| 7 | A | B | -2.0413 | |
| 8 | K | B | -2.1004 | |
| 9 | A | B | -1.6979 | |
| 10 | E | B | -1.8423 | |
| 11 | A | B | 0.0000 | |
| 12 | E | B | -2.7737 | |
| 13 | A | B | -1.6317 | |
| 14 | K | B | 0.0000 | |
| 15 | A | B | -2.3279 | |
| 16 | K | B | -2.5282 | |
| 1 | A | C | -1.3615 | |
| 2 | E | C | -2.1262 | |
| 3 | A | C | -1.6022 | |
| 4 | E | C | -1.7415 | |
| 5 | A | C | -1.8305 | |
| 6 | K | C | -1.8261 | |
| 7 | A | C | -1.7238 | |
| 8 | K | C | -1.8477 | |
| 9 | A | C | 0.0000 | |
| 10 | E | C | -2.9624 | |
| 11 | A | C | -2.6488 | |
| 12 | E | C | -2.5730 | |
| 13 | A | C | -2.6702 | |
| 14 | K | C | -3.3798 | |
| 15 | A | C | -2.9646 | |
| 16 | K | C | -2.9361 | |
| 1 | A | D | -1.7650 | |
| 2 | E | D | -2.7220 | |
| 3 | A | D | -2.1593 | |
| 4 | E | D | -3.0085 | |
| 5 | A | D | -2.6130 | |
| 6 | K | D | -2.7346 | |
| 7 | A | D | -2.3202 | |
| 8 | K | D | -2.6850 | |
| 9 | A | D | 0.0000 | |
| 10 | E | D | -3.3054 | |
| 11 | A | D | -2.2114 | |
| 12 | E | D | -2.6249 | |
| 13 | A | D | -3.0585 | |
| 14 | K | D | -3.0102 | |
| 15 | A | D | -1.9686 | |
| 16 | K | D | -2.5865 | |
| 1 | A | E | -1.9026 | |
| 2 | E | E | -2.3769 | |
| 3 | A | E | -1.7082 | |
| 4 | E | E | -1.8435 | |
| 5 | A | E | 0.0000 | |
| 6 | K | E | -1.4904 | |
| 7 | A | E | -1.2559 | |
| 8 | K | E | 0.0000 | |
| 9 | A | E | -1.0904 | |
| 10 | E | E | -1.2442 | |
| 11 | A | E | 0.0000 | |
| 12 | E | E | -1.8219 | |
| 13 | A | E | 0.0000 | |
| 14 | K | E | -1.8185 | |
| 15 | A | E | -2.0035 | |
| 16 | K | E | -2.6709 | |
| 1 | A | F | -1.9486 | |
| 2 | E | F | -2.6334 | |
| 3 | A | F | -2.3080 | |
| 4 | E | F | -2.7139 | |
| 5 | A | F | 0.0000 | |
| 6 | K | F | -1.9412 | |
| 7 | A | F | -1.8755 | |
| 8 | K | F | -1.8228 | |
| 9 | A | F | 0.0000 | |
| 10 | E | F | -1.6246 | |
| 11 | A | F | -1.5646 | |
| 12 | E | F | -1.9884 | |
| 13 | A | F | -2.2772 | |
| 14 | K | F | -2.4156 | |
| 15 | A | F | -1.8430 | |
| 16 | K | F | -2.4391 | |
| 1 | A | G | -1.7397 | |
| 2 | E | G | -3.1115 | |
| 3 | A | G | -1.9970 | |
| 4 | E | G | -2.6415 | |
| 5 | A | G | -2.4490 | |
| 6 | K | G | -1.9640 | |
| 7 | A | G | -1.5423 | |
| 8 | K | G | -1.8223 | |
| 9 | A | G | -1.2202 | |
| 10 | E | G | -1.3832 | |
| 11 | A | G | -1.4448 | |
| 12 | E | G | -2.0107 | |
| 13 | A | G | -2.3020 | |
| 14 | K | G | -2.8314 | |
| 15 | A | G | -2.0093 | |
| 16 | K | G | -3.0548 | |
| 1 | A | H | -1.9378 | |
| 2 | E | H | -3.2748 | |
| 3 | A | H | -2.2743 | |
| 4 | E | H | -2.5986 | |
| 5 | A | H | 0.0000 | |
| 6 | K | H | -1.6151 | |
| 7 | A | H | -1.6524 | |
| 8 | K | H | -1.5969 | |
| 9 | A | H | -1.4235 | |
| 10 | E | H | -1.4596 | |
| 11 | A | H | -1.5122 | |
| 12 | E | H | -2.1502 | |
| 13 | A | H | -2.6070 | |
| 14 | K | H | -2.9082 | |
| 15 | A | H | -2.0463 | |
| 16 | K | H | -2.7594 | |
| 1 | A | I | -1.5652 | |
| 2 | E | I | -2.7095 | |
| 3 | A | I | -2.5115 | |
| 4 | E | I | -2.7697 | |
| 5 | A | I | -2.2698 | |
| 6 | K | I | -3.1234 | |
| 7 | A | I | -2.5021 | |
| 8 | K | I | -2.3794 | |
| 9 | A | I | -1.6228 | |
| 10 | E | I | -1.9564 | |
| 11 | A | I | -1.8841 | |
| 12 | E | I | -2.1383 | |
| 13 | A | I | -1.4863 | |
| 14 | K | I | -2.1395 | |
| 15 | A | I | -1.9902 | |
| 16 | K | I | -2.3727 | |
| 1 | A | J | -1.3921 | |
| 2 | E | J | -2.6503 | |
| 3 | A | J | -1.3875 | |
| 4 | E | J | -2.0372 | |
| 5 | A | J | -1.6763 | |
| 6 | K | J | -1.6439 | |
| 7 | A | J | -1.4185 | |
| 8 | K | J | -1.9046 | |
| 9 | A | J | 0.0000 | |
| 10 | E | J | -1.4650 | |
| 11 | A | J | -1.8787 | |
| 12 | E | J | -2.0191 | |
| 13 | A | J | -2.2713 | |
| 14 | K | J | -3.4771 | |
| 15 | A | J | -2.8304 | |
| 16 | K | J | -3.2745 | |
| 1 | A | K | -1.5319 | |
| 2 | E | K | -2.7740 | |
| 3 | A | K | -2.2000 | |
| 4 | E | K | -2.9867 | |
| 5 | A | K | -2.5281 | |
| 6 | K | K | -2.7185 | |
| 7 | A | K | -2.2523 | |
| 8 | K | K | -2.7180 | |
| 9 | A | K | -2.1445 | |
| 10 | E | K | -2.6954 | |
| 11 | A | K | -2.3975 | |
| 12 | E | K | -2.2754 | |
| 13 | A | K | 0.0000 | |
| 14 | K | K | -3.3851 | |
| 15 | A | K | -2.5102 | |
| 16 | K | K | -2.7678 | |
| 1 | A | L | -1.4006 | |
| 2 | E | L | -2.2582 | |
| 3 | A | L | -1.6727 | |
| 4 | E | L | -1.9100 | |
| 5 | A | L | -1.8918 | |
| 6 | K | L | -2.1197 | |
| 7 | A | L | -1.4829 | |
| 8 | K | L | -1.5233 | |
| 9 | A | L | -1.1720 | |
| 10 | E | L | -1.3290 | |
| 11 | A | L | -1.3424 | |
| 12 | E | L | -1.6617 | |
| 13 | A | L | -1.6078 | |
| 14 | K | L | -1.7917 | |
| 15 | A | L | -2.0936 | |
| 16 | K | L | -2.4697 | |
| 1 | A | M | -1.5014 | |
| 2 | E | M | -2.6476 | |
| 3 | A | M | -2.4459 | |
| 4 | E | M | -2.8012 | |
| 5 | A | M | -2.2804 | |
| 6 | K | M | -2.0980 | |
| 7 | A | M | -1.9487 | |
| 8 | K | M | -2.1914 | |
| 9 | A | M | 0.0000 | |
| 10 | E | M | -1.4986 | |
| 11 | A | M | -1.6078 | |
| 12 | E | M | 0.0000 | |
| 13 | A | M | 0.0000 | |
| 14 | K | M | -1.8122 | |
| 15 | A | M | -1.8608 | |
| 16 | K | M | -2.6525 | |
| 1 | A | N | -1.4320 | |
| 2 | E | N | -2.3100 | |
| 3 | A | N | -1.9143 | |
| 4 | E | N | -1.9484 | |
| 5 | A | N | -2.1164 | |
| 6 | K | N | -2.4228 | |
| 7 | A | N | -1.6741 | |
| 8 | K | N | -1.6021 | |
| 9 | A | N | -1.3137 | |
| 10 | E | N | -1.4764 | |
| 11 | A | N | 0.0000 | |
| 12 | E | N | -1.7789 | |
| 13 | A | N | -1.2353 | |
| 14 | K | N | 0.0000 | |
| 15 | A | N | -2.0995 | |
| 16 | K | N | -2.2586 | |
| 1 | A | O | -1.4962 | |
| 2 | E | O | -2.6793 | |
| 3 | A | O | -2.1011 | |
| 4 | E | O | -2.9300 | |
| 5 | A | O | -2.5426 | |
| 6 | K | O | -2.3134 | |
| 7 | A | O | -2.3651 | |
| 8 | K | O | -3.0389 | |
| 9 | A | O | -2.2452 | |
| 10 | E | O | -2.0994 | |
| 11 | A | O | -2.3658 | |
| 12 | E | O | -3.0960 | |
| 13 | A | O | 0.0000 | |
| 14 | K | O | -2.2466 | |
| 15 | A | O | -2.2347 | |
| 16 | K | O | -2.8193 | |
| 1 | A | P | -1.6821 | |
| 2 | E | P | -2.9877 | |
| 3 | A | P | -2.5373 | |
| 4 | E | P | -3.3701 | |
| 5 | A | P | -2.9386 | |
| 6 | K | P | -3.5909 | |
| 7 | A | P | -3.0124 | |
| 8 | K | P | -3.5139 | |
| 9 | A | P | -2.5128 | |
| 10 | E | P | -2.4946 | |
| 11 | A | P | -2.8159 | |
| 12 | E | P | -2.9979 | |
| 13 | A | P | -1.9999 | |
| 14 | K | P | -2.5254 | |
| 15 | A | P | -2.0885 | |
| 16 | K | P | -2.3023 | |
| 1 | A | Q | -1.5013 | |
| 2 | E | Q | -2.7308 | |
| 3 | A | Q | -2.4273 | |
| 4 | E | Q | -2.9171 | |
| 5 | A | Q | -2.4875 | |
| 6 | K | Q | -2.5210 | |
| 7 | A | Q | -2.5869 | |
| 8 | K | Q | -3.0775 | |
| 9 | A | Q | -2.4746 | |
| 10 | E | Q | -2.1745 | |
| 11 | A | Q | -2.1845 | |
| 12 | E | Q | -2.9896 | |
| 13 | A | Q | 0.0000 | |
| 14 | K | Q | -2.1766 | |
| 15 | A | Q | -2.1423 | |
| 16 | K | Q | -2.5427 | |
| 1 | A | R | -1.5039 | |
| 2 | E | R | -2.4417 | |
| 3 | A | R | -1.9984 | |
| 4 | E | R | -2.2689 | |
| 5 | A | R | -2.3741 | |
| 6 | K | R | -3.1374 | |
| 7 | A | R | -2.5169 | |
| 8 | K | R | -2.9914 | |
| 9 | A | R | -2.3931 | |
| 10 | E | R | -2.8660 | |
| 11 | A | R | 0.0000 | |
| 12 | E | R | -3.3372 | |
| 13 | A | R | -2.0285 | |
| 14 | K | R | 0.0000 | |
| 15 | A | R | -2.4887 | |
| 16 | K | R | -2.4882 | |
| 1 | A | S | -1.7120 | |
| 2 | E | S | -2.6543 | |
| 3 | A | S | -2.0742 | |
| 4 | E | S | -2.7323 | |
| 5 | A | S | -2.2929 | |
| 6 | K | S | -2.2749 | |
| 7 | A | S | -1.8009 | |
| 8 | K | S | -1.9086 | |
| 9 | A | S | 0.0000 | |
| 10 | E | S | -1.8589 | |
| 11 | A | S | -1.6237 | |
| 12 | E | S | 0.0000 | |
| 13 | A | S | 0.0000 | |
| 14 | K | S | -2.1569 | |
| 15 | A | S | -1.7250 | |
| 16 | K | S | -2.4316 | |
| 1 | A | T | -1.4230 | |
| 2 | E | T | -2.3939 | |
| 3 | A | T | -1.6557 | |
| 4 | E | T | -2.0230 | |
| 5 | A | T | -2.4633 | |
| 6 | K | T | -2.9321 | |
| 7 | A | T | -2.3062 | |
| 8 | K | T | -2.5100 | |
| 9 | A | T | -2.3206 | |
| 10 | E | T | -2.9651 | |
| 11 | A | T | 0.0000 | |
| 12 | E | T | -2.7651 | |
| 13 | A | T | -2.1528 | |
| 14 | K | T | -3.0007 | |
| 15 | A | T | -2.7591 | |
| 16 | K | T | -2.5723 |