| Chain sequence(s) |
H: QVQLEQSGAEIKKPGSSVTVSCTGSGGIFSSHIVSWVRQAPGQGLEWVGGIVPLFDTTNYAEKFQGRVTITVDESRATTYMELSSLESEDTAIYYCTRGRAPGDIGKTGGIFDHWGQGTLVTVSS
L: DIQMTQSPTSLSASVGDRVTITCRATQGISNYLAWFQQKPGKAPKSLIYEASSLQSGVPSRFSGSGSGSGTDFTLTISSLQPEDFAIYYCQQYNSYPWTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:14)
[INFO] Main: Simulation completed successfully. (00:01:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6406 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -2.4458 | |
| 4 | L | H | 0.0000 | |
| 5 | E | H | -2.5524 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.8576 | |
| 8 | G | H | -0.9032 | |
| 9 | A | H | 0.1791 | |
| 11 | E | H | 0.2919 | |
| 12 | I | H | 1.2418 | |
| 13 | K | H | -0.6972 | |
| 14 | K | H | -2.0600 | |
| 15 | P | H | -2.0109 | |
| 16 | G | H | -1.5640 | |
| 17 | S | H | -1.2915 | |
| 18 | S | H | -0.8175 | |
| 19 | V | H | 0.0000 | |
| 20 | T | H | -0.2779 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.2990 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.4458 | |
| 25 | G | H | -1.1896 | |
| 26 | S | H | -1.0886 | |
| 27 | G | H | -1.1131 | |
| 28 | G | H | -0.2537 | |
| 29 | I | H | 1.6177 | |
| 30 | F | H | 0.6780 | |
| 35 | S | H | 0.6010 | |
| 36 | S | H | 0.8134 | |
| 37 | H | H | 0.0000 | |
| 38 | I | H | 0.0000 | |
| 39 | V | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5021 | |
| 45 | A | H | -0.9292 | |
| 46 | P | H | -0.9893 | |
| 47 | G | H | -1.2136 | |
| 48 | Q | H | -1.8086 | |
| 49 | G | H | -1.2289 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9834 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | V | H | 0.5771 | |
| 58 | P | H | 0.3311 | |
| 59 | L | H | 1.7039 | |
| 62 | F | H | 1.8209 | |
| 63 | D | H | -0.4902 | |
| 64 | T | H | 0.0159 | |
| 65 | T | H | -0.2221 | |
| 66 | N | H | -0.4109 | |
| 67 | Y | H | -0.8052 | |
| 68 | A | H | 0.0000 | |
| 69 | E | H | -3.1820 | |
| 70 | K | H | -3.0209 | |
| 71 | F | H | 0.0000 | |
| 72 | Q | H | -2.5972 | |
| 74 | G | H | -1.6704 | |
| 75 | R | H | -1.2328 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.4681 | |
| 78 | I | H | 0.0000 | |
| 79 | T | H | -0.3653 | |
| 80 | V | H | -1.1172 | |
| 81 | D | H | -2.3466 | |
| 82 | E | H | -2.7052 | |
| 83 | S | H | -2.1909 | |
| 84 | R | H | -2.7988 | |
| 85 | A | H | -1.6689 | |
| 86 | T | H | 0.0000 | |
| 87 | T | H | 0.0000 | |
| 88 | Y | H | 0.1175 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -0.4092 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.7923 | |
| 93 | S | H | -1.1850 | |
| 94 | L | H | 0.0000 | |
| 95 | E | H | -2.6955 | |
| 96 | S | H | -2.2109 | |
| 97 | E | H | -2.4444 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6394 | |
| 100 | A | H | 0.0000 | |
| 101 | I | H | 0.3797 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | T | H | 0.0000 | |
| 106 | R | H | -0.5249 | |
| 107 | G | H | 0.0000 | |
| 108 | R | H | -0.6779 | |
| 109 | A | H | -0.3218 | |
| 110 | P | H | -0.2028 | |
| 111 | G | H | -0.4184 | |
| 111A | D | H | -0.3654 | |
| 111B | I | H | 1.2033 | |
| 112C | G | H | -0.0373 | |
| 112B | K | H | -0.4725 | |
| 112A | T | H | -0.4016 | |
| 112 | G | H | 0.0000 | |
| 113 | G | H | 0.0000 | |
| 114 | I | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.6246 | |
| 117 | H | H | -1.0689 | |
| 118 | W | H | -1.1677 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -2.1755 | |
| 121 | G | H | -1.0414 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 0.6427 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0043 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7946 | |
| 128 | S | H | -0.7361 | |
| 1 | D | L | -2.2655 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.1790 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3021 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7122 | |
| 8 | P | L | -0.5119 | |
| 9 | T | L | -0.5965 | |
| 10 | S | L | -0.7373 | |
| 11 | L | L | -0.4263 | |
| 12 | S | L | -0.5350 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.0772 | |
| 15 | V | L | 0.6405 | |
| 16 | G | L | -0.4610 | |
| 17 | D | L | -1.3952 | |
| 18 | R | L | -2.1111 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5887 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7416 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3852 | |
| 25 | A | L | 0.0000 | |
| 26 | T | L | -1.7812 | |
| 27 | Q | L | -1.9483 | |
| 28 | G | L | -1.1680 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.8049 | |
| 37 | N | L | -0.6047 | |
| 38 | Y | L | -0.2006 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.5082 | |
| 46 | P | L | -1.1270 | |
| 47 | G | L | -1.5951 | |
| 48 | K | L | -2.4377 | |
| 49 | A | L | -1.5041 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1885 | |
| 52 | S | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1799 | |
| 56 | E | L | -0.2457 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.3142 | |
| 66 | S | L | 0.0256 | |
| 67 | L | L | 0.3140 | |
| 68 | Q | L | -0.1903 | |
| 69 | S | L | -0.3676 | |
| 70 | G | L | -0.5634 | |
| 71 | V | L | -0.2794 | |
| 72 | P | L | -0.3558 | |
| 74 | S | L | -0.4182 | |
| 75 | R | L | -0.8503 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3330 | |
| 78 | G | L | -0.2531 | |
| 79 | S | L | -0.6450 | |
| 80 | G | L | -0.8454 | |
| 81 | S | L | -0.8761 | |
| 82 | G | L | -0.9039 | |
| 83 | S | L | -1.0861 | |
| 84 | G | L | -1.3962 | |
| 85 | T | L | -1.7679 | |
| 86 | D | L | -1.7164 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6337 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3720 | |
| 93 | S | L | -1.0321 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.4991 | |
| 96 | P | L | -0.6363 | |
| 97 | E | L | -1.6370 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.2898 | |
| 100 | A | L | 0.0000 | |
| 101 | I | L | -0.3965 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | N | L | -0.4246 | |
| 109 | S | L | -0.1568 | |
| 114 | Y | L | 0.1873 | |
| 115 | P | L | 0.0000 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.7240 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.3465 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3480 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.4129 | |
| 126 | I | L | 0.9480 | |
| 127 | K | L | -0.7816 |