| Chain sequence(s) |
A: SKGHKGH
C: SKGHKGH B: SKGHKGH E: SKGHKGH D: SKGHKGH G: SKGHKGH F: SKGHKGH I: SKGHKGH H: SKGHKGH K: SKGHKGH J: SKGHKGH M: SKGHKGH L: SKGHKGH O: SKGHKGH N: SKGHKGH Q: SKGHKGH P: SKGHKGH S: SKGHKGH R: SKGHKGH T: SKGHKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:11)
[INFO] Main: Simulation completed successfully. (00:08:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -2.3722 | |
| 2 | K | A | -3.6787 | |
| 3 | G | A | -2.3953 | |
| 4 | H | A | 0.0000 | |
| 5 | K | A | -1.8307 | |
| 6 | G | A | 0.0000 | |
| 7 | H | A | -1.6733 | |
| 1 | S | B | -2.4710 | |
| 2 | K | B | -3.7162 | |
| 3 | G | B | -2.4698 | |
| 4 | H | B | 0.0000 | |
| 5 | K | B | -1.7854 | |
| 6 | G | B | 0.0000 | |
| 7 | H | B | -1.8280 | |
| 1 | S | C | -2.3570 | |
| 2 | K | C | -3.5794 | |
| 3 | G | C | -2.4191 | |
| 4 | H | C | 0.0000 | |
| 5 | K | C | -1.7783 | |
| 6 | G | C | 0.0000 | |
| 7 | H | C | -1.7110 | |
| 1 | S | D | -2.2921 | |
| 2 | K | D | -3.3631 | |
| 3 | G | D | -2.1871 | |
| 4 | H | D | 0.0000 | |
| 5 | K | D | -1.8100 | |
| 6 | G | D | 0.0000 | |
| 7 | H | D | -1.8075 | |
| 1 | S | E | -2.2834 | |
| 2 | K | E | -3.4822 | |
| 3 | G | E | -2.1235 | |
| 4 | H | E | 0.0000 | |
| 5 | K | E | -1.9988 | |
| 6 | G | E | 0.0000 | |
| 7 | H | E | -1.8973 | |
| 1 | S | F | -2.2909 | |
| 2 | K | F | -3.4365 | |
| 3 | G | F | -2.2992 | |
| 4 | H | F | 0.0000 | |
| 5 | K | F | -2.0964 | |
| 6 | G | F | 0.0000 | |
| 7 | H | F | -2.3295 | |
| 1 | S | G | -2.5281 | |
| 2 | K | G | -3.6377 | |
| 3 | G | G | -2.8611 | |
| 4 | H | G | -3.0497 | |
| 5 | K | G | -2.9899 | |
| 6 | G | G | -2.4380 | |
| 7 | H | G | -2.4064 | |
| 1 | S | H | -2.0754 | |
| 2 | K | H | -3.2886 | |
| 3 | G | H | -2.6943 | |
| 4 | H | H | -3.1126 | |
| 5 | K | H | -3.3596 | |
| 6 | G | H | -2.2827 | |
| 7 | H | H | -2.1480 | |
| 1 | S | I | -2.2838 | |
| 2 | K | I | -3.1388 | |
| 3 | G | I | -2.1723 | |
| 4 | H | I | -2.4453 | |
| 5 | K | I | -2.6902 | |
| 6 | G | I | 0.0000 | |
| 7 | H | I | -2.1411 | |
| 1 | S | J | -2.3635 | |
| 2 | K | J | -3.3371 | |
| 3 | G | J | -2.4956 | |
| 4 | H | J | 0.0000 | |
| 5 | K | J | -2.4179 | |
| 6 | G | J | 0.0000 | |
| 7 | H | J | -2.0541 | |
| 1 | S | K | -2.4733 | |
| 2 | K | K | -3.5770 | |
| 3 | G | K | -2.2494 | |
| 4 | H | K | 0.0000 | |
| 5 | K | K | -2.1081 | |
| 6 | G | K | 0.0000 | |
| 7 | H | K | -1.8976 | |
| 1 | S | L | -2.5251 | |
| 2 | K | L | -3.6197 | |
| 3 | G | L | -2.3267 | |
| 4 | H | L | 0.0000 | |
| 5 | K | L | -1.8822 | |
| 6 | G | L | 0.0000 | |
| 7 | H | L | -1.9436 | |
| 1 | S | M | -2.3562 | |
| 2 | K | M | -3.6367 | |
| 3 | G | M | -2.2896 | |
| 4 | H | M | 0.0000 | |
| 5 | K | M | -2.0515 | |
| 6 | G | M | 0.0000 | |
| 7 | H | M | -1.8352 | |
| 1 | S | N | -2.2258 | |
| 2 | K | N | -3.3550 | |
| 3 | G | N | -2.2398 | |
| 4 | H | N | 0.0000 | |
| 5 | K | N | -1.9589 | |
| 6 | G | N | 0.0000 | |
| 7 | H | N | -1.7734 | |
| 1 | S | O | -2.4449 | |
| 2 | K | O | -3.6700 | |
| 3 | G | O | -2.5416 | |
| 4 | H | O | 0.0000 | |
| 5 | K | O | -2.2930 | |
| 6 | G | O | 0.0000 | |
| 7 | H | O | -2.0402 | |
| 1 | S | P | -2.2181 | |
| 2 | K | P | -3.1343 | |
| 3 | G | P | -1.9677 | |
| 4 | H | P | 0.0000 | |
| 5 | K | P | -1.7312 | |
| 6 | G | P | 0.0000 | |
| 7 | H | P | -1.6447 | |
| 1 | S | Q | -2.4864 | |
| 2 | K | Q | -3.2248 | |
| 3 | G | Q | -2.6039 | |
| 4 | H | Q | -2.6889 | |
| 5 | K | Q | -2.8353 | |
| 6 | G | Q | -2.3081 | |
| 7 | H | Q | -2.1614 | |
| 1 | S | R | -2.2004 | |
| 2 | K | R | -3.0889 | |
| 3 | G | R | -2.0622 | |
| 4 | H | R | 0.0000 | |
| 5 | K | R | -1.7288 | |
| 6 | G | R | 0.0000 | |
| 7 | H | R | -2.0174 | |
| 1 | S | S | -2.5433 | |
| 2 | K | S | -3.5840 | |
| 3 | G | S | -2.7786 | |
| 4 | H | S | 0.0000 | |
| 5 | K | S | -2.7859 | |
| 6 | G | S | -2.6208 | |
| 7 | H | S | -2.3307 | |
| 1 | S | T | -2.2468 | |
| 2 | K | T | -3.3251 | |
| 3 | G | T | -2.9383 | |
| 4 | H | T | -3.3389 | |
| 5 | K | T | -3.4504 | |
| 6 | G | T | -2.5967 | |
| 7 | H | T | -2.0183 |