| Chain sequence(s) |
A: EKLPLRENKRVPLTALLNQSRGERRGPPSDGH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 321 | E | A | -1.9766 | |
| 322 | K | A | -1.6768 | |
| 323 | L | A | 0.2126 | |
| 324 | P | A | -0.2754 | |
| 325 | L | A | -0.2377 | |
| 326 | R | A | -2.4481 | |
| 327 | E | A | -3.6895 | |
| 328 | N | A | -3.5162 | |
| 329 | K | A | -3.4894 | |
| 330 | R | A | -2.3025 | |
| 331 | V | A | 0.4888 | |
| 332 | P | A | 0.8013 | |
| 333 | L | A | 2.2222 | |
| 334 | T | A | 1.5274 | |
| 335 | A | A | 1.3976 | |
| 336 | L | A | 2.0026 | |
| 337 | L | A | 1.3477 | |
| 338 | N | A | -1.1158 | |
| 339 | Q | A | -1.6612 | |
| 340 | S | A | -2.0504 | |
| 341 | R | A | -3.1593 | |
| 342 | G | A | -3.0190 | |
| 343 | E | A | -3.9336 | |
| 344 | R | A | -4.1296 | |
| 345 | R | A | -3.4691 | |
| 346 | G | A | -2.1895 | |
| 347 | P | A | -1.4358 | |
| 348 | P | A | -1.4721 | |
| 349 | S | A | -1.6886 | |
| 350 | D | A | -2.4962 | |
| 351 | G | A | -1.9130 | |
| 352 | H | A | -1.8260 |