| Chain sequence(s) |
A: TFCGETCRVIPVCTYSAALGCTCDDRSDGLCKRNGDP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | -0.8023 | |
| 2 | F | A | 0.1286 | |
| 3 | C | A | -0.4455 | |
| 4 | G | A | -0.2362 | |
| 5 | E | A | -0.2573 | |
| 6 | T | A | -0.2669 | |
| 7 | C | A | 0.0000 | |
| 8 | R | A | -1.0200 | |
| 9 | V | A | 1.2986 | |
| 10 | I | A | 2.2939 | |
| 11 | P | A | 0.8168 | |
| 12 | V | A | 1.8603 | |
| 13 | C | A | 0.0000 | |
| 14 | T | A | 1.1114 | |
| 15 | Y | A | 1.5640 | |
| 16 | S | A | 0.7086 | |
| 17 | A | A | 0.8192 | |
| 18 | A | A | 0.9851 | |
| 19 | L | A | 1.0391 | |
| 20 | G | A | 0.0776 | |
| 21 | C | A | 0.0000 | |
| 22 | T | A | -0.2747 | |
| 23 | C | A | -0.9752 | |
| 24 | D | A | -1.9581 | |
| 25 | D | A | -2.2124 | |
| 26 | R | A | -3.0457 | |
| 27 | S | A | -1.7131 | |
| 28 | D | A | -2.3097 | |
| 29 | G | A | -1.8031 | |
| 30 | L | A | -0.6488 | |
| 31 | C | A | 0.0000 | |
| 32 | K | A | -1.1007 | |
| 33 | R | A | -1.7725 | |
| 34 | N | A | -2.3126 | |
| 35 | G | A | -2.1368 | |
| 36 | D | A | -2.7104 | |
| 37 | P | A | -2.0925 |