Project name: query_structure

Status: done

Started: 2026-03-16 23:11:37
Settings
Chain sequence(s) A: TFCGETCRVIPVCTYSAALGCTCDDRSDGLCKRNGDP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:42)
Show buried residues

Minimal score value
-3.0457
Maximal score value
2.2939
Average score
-0.47
Total score value
-17.3913

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 T A -0.8023
2 F A 0.1286
3 C A -0.4455
4 G A -0.2362
5 E A -0.2573
6 T A -0.2669
7 C A 0.0000
8 R A -1.0200
9 V A 1.2986
10 I A 2.2939
11 P A 0.8168
12 V A 1.8603
13 C A 0.0000
14 T A 1.1114
15 Y A 1.5640
16 S A 0.7086
17 A A 0.8192
18 A A 0.9851
19 L A 1.0391
20 G A 0.0776
21 C A 0.0000
22 T A -0.2747
23 C A -0.9752
24 D A -1.9581
25 D A -2.2124
26 R A -3.0457
27 S A -1.7131
28 D A -2.3097
29 G A -1.8031
30 L A -0.6488
31 C A 0.0000
32 K A -1.1007
33 R A -1.7725
34 N A -2.3126
35 G A -2.1368
36 D A -2.7104
37 P A -2.0925
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Laboratory of Theory of Biopolymers 2018