| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDANYYYSYGDVIYYRITYGETGGNSPVQEFTVPYYYSTATISGLKPGVDYTITVYAYDEYYTYGWSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46)
[INFO] Main: Simulation completed successfully. (00:00:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6125 | |
| 2 | S | A | 0.0087 | |
| 3 | D | A | -0.4836 | |
| 4 | V | A | -0.9672 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.5126 | |
| 7 | D | A | -3.4510 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1273 | |
| 10 | V | A | 0.0808 | |
| 11 | V | A | 1.5331 | |
| 12 | A | A | 0.8918 | |
| 13 | A | A | 0.2902 | |
| 14 | T | A | -0.3503 | |
| 15 | P | A | -1.1359 | |
| 16 | T | A | -0.9994 | |
| 17 | S | A | -0.5353 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7344 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.7159 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.3637 | |
| 24 | A | A | -0.2914 | |
| 25 | N | A | 0.1917 | |
| 26 | Y | A | 1.8276 | |
| 27 | Y | A | 2.1619 | |
| 28 | Y | A | 1.3968 | |
| 29 | S | A | 1.0357 | |
| 30 | Y | A | 1.3940 | |
| 31 | G | A | 0.5188 | |
| 32 | D | A | 0.5569 | |
| 33 | V | A | 0.9388 | |
| 34 | I | A | 0.9424 | |
| 35 | Y | A | 1.1211 | |
| 36 | Y | A | 0.0000 | |
| 37 | R | A | -0.2812 | |
| 38 | I | A | 0.0000 | |
| 39 | T | A | -0.5284 | |
| 40 | Y | A | -0.2942 | |
| 41 | G | A | 0.0000 | |
| 42 | E | A | -1.5947 | |
| 43 | T | A | -1.2780 | |
| 44 | G | A | -1.2468 | |
| 45 | G | A | -1.4063 | |
| 46 | N | A | -1.5405 | |
| 47 | S | A | -0.8477 | |
| 48 | P | A | -0.3270 | |
| 49 | V | A | 0.4215 | |
| 50 | Q | A | -0.8763 | |
| 51 | E | A | -1.6246 | |
| 52 | F | A | -0.6461 | |
| 53 | T | A | 0.0744 | |
| 54 | V | A | 0.0000 | |
| 55 | P | A | 1.3009 | |
| 56 | Y | A | 2.2313 | |
| 57 | Y | A | 2.5945 | |
| 58 | Y | A | 2.0127 | |
| 59 | S | A | 0.6935 | |
| 60 | T | A | 0.4146 | |
| 61 | A | A | 0.0000 | |
| 62 | T | A | 0.2891 | |
| 63 | I | A | 0.0000 | |
| 64 | S | A | -0.6573 | |
| 65 | G | A | -1.0301 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -2.3852 | |
| 68 | P | A | -1.6729 | |
| 69 | G | A | -1.4623 | |
| 70 | V | A | -1.4404 | |
| 71 | D | A | -2.1364 | |
| 72 | Y | A | 0.0000 | |
| 73 | T | A | -0.8095 | |
| 74 | I | A | 0.0000 | |
| 75 | T | A | -0.1758 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | 0.2529 | |
| 78 | A | A | 0.0000 | |
| 79 | Y | A | 0.5164 | |
| 80 | D | A | 0.1930 | |
| 81 | E | A | -0.6817 | |
| 82 | Y | A | 1.1638 | |
| 83 | Y | A | 1.5228 | |
| 84 | T | A | 0.9411 | |
| 85 | Y | A | 1.4645 | |
| 86 | G | A | 0.5360 | |
| 87 | W | A | 0.3949 | |
| 88 | S | A | 0.2035 | |
| 89 | S | A | -0.2685 | |
| 90 | P | A | -0.2955 | |
| 91 | I | A | -0.4190 | |
| 92 | S | A | -0.7646 | |
| 93 | I | A | -0.7506 | |
| 94 | N | A | -1.7637 | |
| 95 | Y | A | -1.5202 | |
| 96 | R | A | -2.5702 | |
| 97 | T | A | -1.5352 |