Project name: 19293a10be77a5b [mutate: LG40B] [mutate: GS40B] [mutate: SL40B, LS39B]

Status: done

Started: 2026-03-10 16:54:41
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Chain sequence(s) C: DARRKAEMLQNEAKTLLAQANSKLQLLKDLERKYEDNQRYLEDKAQELARLEGEVRSLLKDISQKVAVYSTCL
B: ENVERWQGQYEGLRGQDLGQAVLDAGHSVSTLEKTLPQLSAKLSILENRGVHNASLALSASIGRVRELCAQARGAASKVKV
D: DTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIEEIMKCIRNLEDIRKTLPSGCFNTPSIEKP
input PDB
Selected Chain(s) B,C,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues SL40B,LS39B
Energy difference between WT (input) and mutated protein (by FoldX) 2.84969 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       FoldX:    Building mutant model                                                       (00:03:32)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:04:14)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:57)
Show buried residues

Minimal score value
-4.2237
Maximal score value
1.7673
Average score
-1.4898
Total score value
-351.6002

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E B -2.8729
2 N B -2.3170
3 V B -0.8212
4 E B -2.9636
5 R B -3.2710
6 W B -1.2774
7 Q B -1.8822
8 G B -2.4984
9 Q B -2.0995
10 Y B -1.6927
11 E B -2.8779
12 G B -2.0283
13 L B -1.1667
14 R B -2.9622
15 G B -2.9567
16 Q B -2.5063
17 D B -2.5452
18 L B -2.5111
19 G B -1.6143
20 Q B -1.5491
21 A B 0.0000
22 V B 0.0000
23 L B 0.0487
24 D B -1.0077
25 A B 0.0000
26 G B -1.0362
27 H B -1.2929
28 S B -1.3792
29 V B 0.0000
30 S B -1.5296
31 T B -1.7195
32 L B 0.0000
33 E B -3.1287
34 K B -2.8540
35 T B -1.8480
36 L B 0.0000
37 P B -1.5826
38 Q B -1.5299
39 S B 0.0000 mutated: LS39B
40 L B -0.1294 mutated: SL40B
41 A B -0.0147
42 K B -0.3675
43 L B 0.0000
44 S B -0.3317
45 I B 0.6123
46 L B 0.0000
47 E B -2.0180
48 N B -1.5229
49 R B -0.9029
50 G B -0.4787
51 V B 0.8582
52 H B 0.0587
53 N B -0.5641
54 A B 0.0000
55 S B 0.4189
56 L B 1.2990
57 A B 0.3360
58 L B 0.0000
59 S B -0.0531
60 A B -0.0386
61 S B -0.6833
62 I B 0.0000
63 G B -1.8923
64 R B -2.3713
65 V B 0.0000
66 R B -2.8602
67 E B -3.2218
68 L B 0.0000
69 C B 0.0000
70 A B -1.8994
71 Q B -2.0481
72 A B 0.0000
73 R B -2.2023
74 G B -1.5653
75 A B -1.6893
76 A B 0.0000
77 S B -1.6104
78 K B -2.2208
79 V B 0.0000
80 K B -1.2967
81 V B 0.6479
1 D C -2.6152
2 A C -2.3951
3 R C -3.2262
4 R C -3.2976
5 K C -2.4882
6 A C 0.0000
7 E C -2.7951
8 M C -1.8863
9 L C 0.0000
10 Q C -2.1769
11 N C -2.3535
12 E C -2.2106
13 A C 0.0000
14 K C -2.2818
15 T C -1.5666
16 L C -1.2171
17 L C -1.5519
18 A C -1.1690
19 Q C -1.6017
20 A C 0.0000
21 N C -1.6353
22 S C -1.4844
23 K C -1.7171
24 L C -1.5483
25 Q C -2.0905
26 L C -1.3421
27 L C 0.0000
28 K C -2.3587
29 D C -2.5608
30 L C 0.0000
31 E C -2.6151
32 R C -3.8053
33 K C -3.4763
34 Y C -2.8949
35 E C -3.5642
36 D C -3.6683
37 N C 0.0000
38 Q C -2.4838
39 R C -3.1084
40 Y C -1.9276
41 L C 0.0000
42 E C -2.6695
43 D C -3.0287
44 K C -2.3132
45 A C -1.8714
46 Q C -2.7642
47 E C -2.5641
48 L C 0.0000
49 A C -1.9495
50 R C -2.7423
51 L C -1.7698
52 E C 0.0000
53 G C -2.0419
54 E C -2.3992
55 V C 0.0000
56 R C -2.3842
57 S C -2.0164
58 L C 0.0000
59 L C -2.3836
60 K C -2.9945
61 D C -2.6899
62 I C 0.0000
63 S C -2.0910
64 Q C -1.9929
65 K C -1.5022
66 V C 0.0000
67 A C -0.3966
68 V C 0.9046
69 Y C 0.6723
70 S C 0.3120
71 T C 0.8508
72 C C 1.4475
73 L C 1.7673
1 D D -1.5078
2 T D -0.4539
3 V D 0.5032
4 D D -1.0002
5 L D -1.3395
6 N D -2.2157
7 K D -2.1152
8 L D 0.0000
9 N D -3.0993
10 E D -3.3593
11 I D 0.0000
12 E D -2.4824
13 G D -2.1320
14 T D -2.2281
15 L D 0.0000
16 N D -2.7008
17 K D -3.6193
18 A D 0.0000
19 K D -2.8985
20 D D -3.5636
21 E D -3.1451
22 M D 0.0000
23 K D -3.0513
24 V D -0.6523
25 S D -1.7423
26 D D -3.1464
27 L D 0.0000
28 D D -3.9926
29 R D -4.1852
30 K D -3.7410
31 V D 0.0000
32 S D -3.1474
33 D D -4.2237
34 L D 0.0000
35 E D -3.7086
36 N D -3.9195
37 E D -3.9413
38 A D 0.0000
39 K D -4.1064
40 K D -3.6844
41 Q D -2.7911
42 E D -2.4684
43 A D -1.8360
44 A D -1.6407
45 I D 0.0000
46 M D -1.2324
47 D D -2.6190
48 Y D -2.0289
49 N D -2.3952
50 R D -3.6589
51 D D -3.2665
52 I D 0.0000
53 E D -3.8132
54 E D -3.6253
55 I D 0.0000
56 M D -2.1498
57 K D -2.9287
58 C D -2.3640
59 I D 0.0000
60 R D -2.8250
61 N D -2.6298
62 L D 0.0000
63 E D -2.8362
64 D D -3.2086
65 I D -2.0116
66 R D -2.6204
67 K D -2.7098
68 T D -1.2434
69 L D 0.0000
70 P D 0.0532
71 S D -0.1982
72 G D 0.3153
73 C D 1.4347
74 F D 1.7618
75 N D 0.1275
76 T D 0.3351
77 P D 0.1095
78 S D -0.3981
79 I D 0.3595
80 E D -1.8240
81 K D -2.1228
82 P D -1.3013
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Laboratory of Theory of Biopolymers 2018