| Chain sequence(s) |
A: GGSIPCIETCVWTGCFLVPGCSCKSDKKCYLN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6494 | |
| 2 | G | A | -0.3476 | |
| 3 | S | A | 0.1485 | |
| 4 | I | A | 1.9197 | |
| 5 | P | A | 0.9460 | |
| 6 | C | A | 1.9168 | |
| 7 | I | A | 2.3704 | |
| 8 | E | A | 1.2811 | |
| 9 | T | A | -0.0428 | |
| 10 | C | A | 0.0000 | |
| 11 | V | A | 0.4863 | |
| 12 | W | A | 1.2402 | |
| 13 | T | A | 0.8715 | |
| 14 | G | A | 0.5580 | |
| 15 | C | A | 1.4941 | |
| 16 | F | A | 2.6192 | |
| 17 | L | A | 2.9477 | |
| 18 | V | A | 2.0582 | |
| 19 | P | A | 0.7126 | |
| 20 | G | A | -0.0630 | |
| 21 | C | A | 0.7318 | |
| 22 | S | A | -0.3690 | |
| 23 | C | A | -0.7565 | |
| 24 | K | A | -1.9052 | |
| 25 | S | A | -1.8433 | |
| 26 | D | A | -2.7559 | |
| 27 | K | A | -2.2620 | |
| 28 | K | A | -1.8337 | |
| 29 | C | A | 0.0000 | |
| 30 | Y | A | 0.1787 | |
| 31 | L | A | 0.3805 | |
| 32 | N | A | -0.8470 |