Project name: query_structure

Status: done

Started: 2026-03-16 23:21:12
Settings
Chain sequence(s) A: GGSIPCIETCVWTGCFLVPGCSCKSDKKCYLN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:15)
Show buried residues

Minimal score value
-2.7559
Maximal score value
2.9477
Average score
0.2871
Total score value
9.1859

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.6494
2 G A -0.3476
3 S A 0.1485
4 I A 1.9197
5 P A 0.9460
6 C A 1.9168
7 I A 2.3704
8 E A 1.2811
9 T A -0.0428
10 C A 0.0000
11 V A 0.4863
12 W A 1.2402
13 T A 0.8715
14 G A 0.5580
15 C A 1.4941
16 F A 2.6192
17 L A 2.9477
18 V A 2.0582
19 P A 0.7126
20 G A -0.0630
21 C A 0.7318
22 S A -0.3690
23 C A -0.7565
24 K A -1.9052
25 S A -1.8433
26 D A -2.7559
27 K A -2.2620
28 K A -1.8337
29 C A 0.0000
30 Y A 0.1787
31 L A 0.3805
32 N A -0.8470
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Laboratory of Theory of Biopolymers 2018