Project name: 4bc24d26955e2bc

Status: done

Started: 2024-12-30 07:41:31
Settings
Chain sequence(s) D: MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEKPTSAPSS
input PDB
Selected Chain(s) D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with D chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:35)
Show buried residues

Minimal score value
-3.7851
Maximal score value
1.9295
Average score
-0.779
Total score value
-134.7634

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M D 0.8753
2 D D 0.5806
3 V D 1.4443
4 T D 1.1587
5 I D 1.3064
6 Q D 0.0000
7 H D -0.3589
8 P D -0.4204
9 W D 0.1514
10 F D 0.0000
11 K D -2.0652
12 R D -1.9718
13 T D 0.0000
14 L D -0.6891
15 G D -1.1535
16 P D -0.5397
17 F D 0.0000
18 Y D 0.1332
19 P D -0.2386
20 S D -0.4278
21 R D -1.9907
22 L D -0.8720
23 F D 0.0000
24 D D -1.9489
25 Q D -2.0423
26 F D -0.9675
27 F D -0.9911
28 G D -1.4565
29 E D -1.7988
30 G D -0.6696
31 L D 1.2612
32 F D 1.8266
33 E D -0.1021
34 Y D 0.8306
35 D D -0.3038
36 L D 1.2935
37 L D 1.4703
38 P D 0.9103
39 F D 1.2375
40 L D 0.7415
41 S D 0.2640
42 S D 0.4770
43 T D 0.9801
44 I D 1.9295
45 S D 0.9296
46 P D 0.0000
47 Y D 0.0000
48 Y D -0.6011
49 R D -1.5971
50 Q D -1.2932
51 S D -0.1343
52 L D 1.3450
53 F D 0.0000
54 R D 0.0529
55 T D 0.5346
56 V D 1.5338
57 L D 0.3437
58 D D -0.4919
59 S D -0.0372
60 G D -0.1017
61 I D 1.2597
62 S D 0.0000
63 E D -0.3972
64 V D 0.0000
65 R D -0.8862
66 S D 0.0000
67 D D -2.6764
68 R D -3.4796
69 D D -3.1307
70 K D -2.3269
71 F D 0.0000
72 V D 0.0000
73 I D 0.0000
74 F D 0.0000
75 L D 0.0000
76 D D -1.1033
77 V D 0.0000
78 K D -2.1254
79 H D -1.7469
80 F D 0.0000
81 S D -1.2079
82 P D 0.0000
83 E D -2.3499
84 D D -2.1387
85 L D 0.0000
86 T D -0.9292
87 V D 0.0000
88 K D -2.2604
89 V D 0.0000
90 Q D -3.1313
91 D D -2.6198
92 D D -1.4528
93 F D -1.6413
94 V D 0.0000
95 E D -2.1939
96 I D 0.0000
97 H D -1.8913
98 G D 0.0000
99 K D -3.7748
100 H D -3.4336
101 N D -3.4276
102 E D -3.3704
103 R D -3.1390
104 Q D -2.8720
105 D D -2.8944
106 D D -2.9899
107 H D -2.0709
108 G D -1.4124
109 Y D -0.7319
110 I D -1.0443
111 S D -2.8172
112 R D -3.7640
113 E D -3.7851
114 F D -2.0267
115 H D -2.1555
116 R D -1.7209
117 R D -2.5041
118 Y D -0.9661
119 R D -0.6790
120 L D 0.0000
121 P D 0.0000
122 S D 0.0000
123 N D 0.0000
124 V D 0.0000
125 D D -0.6730
126 Q D 0.0000
127 S D -1.1475
128 A D -0.4733
129 L D 0.0000
130 S D -0.5786
131 C D 0.0000
132 S D 0.0000
133 L D -1.3560
134 S D -1.0070
135 A D -0.7718
136 D D -1.3605
137 G D -1.2409
138 M D -1.0920
139 L D 0.0000
140 T D 0.0000
141 F D 0.0000
142 C D 0.0000
143 G D 0.0000
144 P D -0.8803
145 K D -1.0039
146 I D 0.3453
147 Q D -0.8673
148 T D -0.9747
149 G D -0.2205
150 L D 0.8683
151 D D -0.0352
152 A D -0.4153
153 T D -0.5915
154 H D -1.1422
155 A D -1.9053
156 E D -3.4672
157 R D -3.0525
158 A D -1.7839
159 I D 0.0000
160 P D -0.6067
161 V D -0.7829
162 S D -1.5401
163 R D -2.8537
164 E D -2.2197
165 E D -2.8841
166 K D -1.8835
167 P D -1.1042
168 T D -0.7969
169 S D -0.8356
170 A D -1.0240
171 P D -0.9065
172 S D -0.4717
173 S D -0.3646
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Laboratory of Theory of Biopolymers 2018