Project name: test

Status: done

Started: 2026-07-03 11:52:39
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Chain sequence(s) A: STSLTQSSDTTVTPGGTATFSNTVGGGPFNYITIRWVRKKPNGPEEFLAGIVPGLEAVNLNPEYNGRVQVSSDKSTKSVYLTISVSEDDTATYYAGRDQDVENNTKFGSTVAVWGQGTLLTVSN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:04)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:04)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:04)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:04)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:04)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:09)
Show buried residues

Minimal score value
-2.9538
Maximal score value
0.8646
Average score
-0.7045
Total score value
-87.3518

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -0.5111
2 T A -0.5152
3 S A -0.3423
4 L A 0.0000
5 T A -0.3895
6 Q A 0.0000
7 S A -0.6502
8 S A -1.1517
9 D A -1.6984
10 T A -0.7604
11 T A -0.3971
12 V A -0.3756
13 T A -0.8917
14 P A -1.4100
15 G A -0.8313
16 G A -0.3614
17 T A -0.3459
18 A A 0.0000
19 T A -0.1583
20 F A 0.0000
21 S A 0.0029
22 N A 0.0000
23 T A -0.4163
24 V A 0.0000
25 G A -0.7391
26 G A -0.9305
27 G A -0.7900
28 P A -0.5011
29 F A 0.0000
30 N A -0.4313
31 Y A 0.8646
32 I A 0.0000
33 T A 0.0366
34 I A 0.0000
35 R A 0.2342
36 W A 0.0000
37 V A 0.0000
38 R A 0.0000
39 K A -2.0494
40 K A -2.0134
41 P A -1.5457
42 N A -2.0027
43 G A -1.8954
44 P A -1.8936
45 E A -2.5472
46 E A -1.4526
47 F A -0.2739
48 L A 0.0000
49 A A 0.0000
50 G A 0.0000
51 I A 0.0000
52 V A 0.0000
53 P A 0.0000
54 G A -0.2378
55 L A 0.7790
56 E A -1.0529
57 A A -0.0430
58 V A 0.2881
59 N A -0.1177
60 L A -0.5383
61 N A -1.0014
62 P A -1.7487
63 E A -2.4016
64 Y A 0.0000
65 N A -2.4767
66 G A -1.8910
67 R A -1.8268
68 V A 0.0000
69 Q A -1.3263
70 V A -0.4389
71 S A -0.5461
72 S A -1.3172
73 D A -1.9738
74 K A -2.5342
75 S A -1.4687
76 T A -1.2299
77 K A -1.8238
78 S A 0.0000
79 V A 0.0000
80 Y A 0.0718
81 L A 0.0000
82 T A -0.4927
83 I A 0.0000
84 S A -0.7350
85 V A 0.0000
86 S A -1.7723
87 E A -2.9538
88 D A -2.7273
89 D A 0.0000
90 T A -0.9881
91 A A 0.0000
92 T A -0.6640
93 Y A 0.0000
94 Y A -0.1046
95 A A 0.0000
96 G A 0.0000
97 R A 0.0000
98 D A 0.0000
99 Q A -1.7521
100 D A -2.1963
101 V A -1.6618
102 E A -2.6897
103 N A -2.6271
104 N A -2.3253
105 T A -1.3854
106 K A -1.4186
107 F A -0.1314
108 G A -0.4440
109 S A -0.2569
110 T A -0.2220
111 V A -0.1442
112 A A -0.3398
113 V A 0.3055
114 W A 0.4297
115 G A 0.0000
116 Q A -0.9941
117 G A -0.7031
118 T A 0.0000
119 L A -0.3246
120 L A 0.0000
121 T A -0.4953
122 V A -0.9492
123 S A -1.0338
124 N A -1.5646
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Laboratory of Theory of Biopolymers 2018