| Chain sequence(s) |
A: STSLTQSSDTTVTPGGTATFSNTVGGGPFNYITIRWVRKKPNGPEEFLAGIVPGLEAVNLNPEYNGRVQVSSDKSTKSVYLTISVSEDDTATYYAGRDQDVENNTKFGSTVAVWGQGTLLTVSN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:04)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:04)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:04)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:04)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:04)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.5111 | |
| 2 | T | A | -0.5152 | |
| 3 | S | A | -0.3423 | |
| 4 | L | A | 0.0000 | |
| 5 | T | A | -0.3895 | |
| 6 | Q | A | 0.0000 | |
| 7 | S | A | -0.6502 | |
| 8 | S | A | -1.1517 | |
| 9 | D | A | -1.6984 | |
| 10 | T | A | -0.7604 | |
| 11 | T | A | -0.3971 | |
| 12 | V | A | -0.3756 | |
| 13 | T | A | -0.8917 | |
| 14 | P | A | -1.4100 | |
| 15 | G | A | -0.8313 | |
| 16 | G | A | -0.3614 | |
| 17 | T | A | -0.3459 | |
| 18 | A | A | 0.0000 | |
| 19 | T | A | -0.1583 | |
| 20 | F | A | 0.0000 | |
| 21 | S | A | 0.0029 | |
| 22 | N | A | 0.0000 | |
| 23 | T | A | -0.4163 | |
| 24 | V | A | 0.0000 | |
| 25 | G | A | -0.7391 | |
| 26 | G | A | -0.9305 | |
| 27 | G | A | -0.7900 | |
| 28 | P | A | -0.5011 | |
| 29 | F | A | 0.0000 | |
| 30 | N | A | -0.4313 | |
| 31 | Y | A | 0.8646 | |
| 32 | I | A | 0.0000 | |
| 33 | T | A | 0.0366 | |
| 34 | I | A | 0.0000 | |
| 35 | R | A | 0.2342 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | K | A | -2.0494 | |
| 40 | K | A | -2.0134 | |
| 41 | P | A | -1.5457 | |
| 42 | N | A | -2.0027 | |
| 43 | G | A | -1.8954 | |
| 44 | P | A | -1.8936 | |
| 45 | E | A | -2.5472 | |
| 46 | E | A | -1.4526 | |
| 47 | F | A | -0.2739 | |
| 48 | L | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | V | A | 0.0000 | |
| 53 | P | A | 0.0000 | |
| 54 | G | A | -0.2378 | |
| 55 | L | A | 0.7790 | |
| 56 | E | A | -1.0529 | |
| 57 | A | A | -0.0430 | |
| 58 | V | A | 0.2881 | |
| 59 | N | A | -0.1177 | |
| 60 | L | A | -0.5383 | |
| 61 | N | A | -1.0014 | |
| 62 | P | A | -1.7487 | |
| 63 | E | A | -2.4016 | |
| 64 | Y | A | 0.0000 | |
| 65 | N | A | -2.4767 | |
| 66 | G | A | -1.8910 | |
| 67 | R | A | -1.8268 | |
| 68 | V | A | 0.0000 | |
| 69 | Q | A | -1.3263 | |
| 70 | V | A | -0.4389 | |
| 71 | S | A | -0.5461 | |
| 72 | S | A | -1.3172 | |
| 73 | D | A | -1.9738 | |
| 74 | K | A | -2.5342 | |
| 75 | S | A | -1.4687 | |
| 76 | T | A | -1.2299 | |
| 77 | K | A | -1.8238 | |
| 78 | S | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | 0.0718 | |
| 81 | L | A | 0.0000 | |
| 82 | T | A | -0.4927 | |
| 83 | I | A | 0.0000 | |
| 84 | S | A | -0.7350 | |
| 85 | V | A | 0.0000 | |
| 86 | S | A | -1.7723 | |
| 87 | E | A | -2.9538 | |
| 88 | D | A | -2.7273 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.9881 | |
| 91 | A | A | 0.0000 | |
| 92 | T | A | -0.6640 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.1046 | |
| 95 | A | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | R | A | 0.0000 | |
| 98 | D | A | 0.0000 | |
| 99 | Q | A | -1.7521 | |
| 100 | D | A | -2.1963 | |
| 101 | V | A | -1.6618 | |
| 102 | E | A | -2.6897 | |
| 103 | N | A | -2.6271 | |
| 104 | N | A | -2.3253 | |
| 105 | T | A | -1.3854 | |
| 106 | K | A | -1.4186 | |
| 107 | F | A | -0.1314 | |
| 108 | G | A | -0.4440 | |
| 109 | S | A | -0.2569 | |
| 110 | T | A | -0.2220 | |
| 111 | V | A | -0.1442 | |
| 112 | A | A | -0.3398 | |
| 113 | V | A | 0.3055 | |
| 114 | W | A | 0.4297 | |
| 115 | G | A | 0.0000 | |
| 116 | Q | A | -0.9941 | |
| 117 | G | A | -0.7031 | |
| 118 | T | A | 0.0000 | |
| 119 | L | A | -0.3246 | |
| 120 | L | A | 0.0000 | |
| 121 | T | A | -0.4953 | |
| 122 | V | A | -0.9492 | |
| 123 | S | A | -1.0338 | |
| 124 | N | A | -1.5646 |