Project name: cac8acca16c6a43 [mutate: QC24A] [mutate: ND28A] [mutate: QE20A, CR24A, DD28A] [mutate: LP26A] [mutate: MS27A]

Status: done

Started: 2026-06-24 02:14:04
Settings
Chain sequence(s) A: HSQGTFTSDYSKYLDSRRAEDFVRWPMDT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues MS27A
Energy difference between WT (input) and mutated protein (by FoldX) 0.502547 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:00:12)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:25)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:37)
Show buried residues

Minimal score value
-3.6323
Maximal score value
1.0583
Average score
-1.2485
Total score value
-36.2055

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 H A -1.3473
2 S A -1.3317
3 Q A -1.3796
4 G A -0.4559
5 T A -0.0318
6 F A 1.0583
7 T A 0.1281
8 S A -0.7188
9 D A -1.3889
10 Y A -0.0613
11 S A -1.2074
12 K A -2.5122
13 Y A -1.4241
14 L A -1.8353
15 D A -3.5137
16 S A -2.6846
17 R A -3.6323
18 R A -3.2909
19 A A -1.8781
20 E A -2.7102
21 D A -1.9599
22 F A 0.3726
23 V A 0.5681
24 R A -1.4119
25 W A 0.0761
26 P A -0.2420
27 S A -0.9023 mutated: MS27A
28 D A -1.6476
29 T A -0.8409
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018