| Chain sequence(s) |
A: FFKGHFG
C: FFKGHFG B: FFKGHFG D: FFKGHFG input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:48)
[INFO] Main: Simulation completed successfully. (00:00:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.0655 | |
| 2 | F | A | 1.8173 | |
| 3 | K | A | -0.2328 | |
| 4 | G | A | 0.0000 | |
| 5 | H | A | -0.1494 | |
| 6 | F | A | 1.1258 | |
| 7 | G | A | 0.7794 | |
| 1 | F | B | 2.2750 | |
| 2 | F | B | 2.0162 | |
| 3 | K | B | -0.0273 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | 0.0332 | |
| 6 | F | B | 0.4999 | |
| 7 | G | B | 1.9416 | |
| 1 | F | C | 2.2237 | |
| 2 | F | C | 1.9571 | |
| 3 | K | C | -0.4017 | |
| 4 | G | C | 0.0000 | |
| 5 | H | C | 0.1901 | |
| 6 | F | C | 0.6670 | |
| 7 | G | C | 0.8399 | |
| 1 | F | D | 2.1380 | |
| 2 | F | D | 1.5098 | |
| 3 | K | D | -0.8574 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | -0.5599 | |
| 6 | F | D | 0.3850 | |
| 7 | G | D | 0.4642 |