| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKFGDTENPTEPQHCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPEGHPLPSALPPSPLYVPPPPTSPYWKLPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTLPENVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9444 | |
| 2 | L | A | 1.9689 | |
| 3 | P | A | 0.6542 | |
| 4 | P | A | 0.3523 | |
| 5 | T | A | 0.1071 | |
| 6 | T | A | 0.1240 | |
| 7 | P | A | 0.1535 | |
| 8 | V | A | 1.2131 | |
| 9 | A | A | 0.0206 | |
| 10 | K | A | -1.1534 | |
| 11 | V | A | -0.4057 | |
| 12 | Q | A | -1.5282 | |
| 13 | S | A | -1.6026 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4100 | |
| 16 | E | A | -2.4339 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4648 | |
| 20 | P | A | 0.1344 | |
| 21 | T | A | 0.1658 | |
| 22 | S | A | -0.0958 | |
| 23 | L | A | 0.0992 | |
| 24 | F | A | -0.0218 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1825 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8105 | |
| 31 | R | A | -2.6459 | |
| 32 | L | A | -0.7657 | |
| 33 | L | A | 1.2237 | |
| 34 | T | A | 1.4560 | |
| 35 | V | A | 1.9841 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2353 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6154 | |
| 40 | K | A | -1.6366 | |
| 41 | D | A | -0.9355 | |
| 42 | I | A | 0.8167 | |
| 43 | V | A | 0.8919 | |
| 44 | K | A | -1.4310 | |
| 45 | D | A | -2.4385 | |
| 46 | G | A | -1.4794 | |
| 47 | K | A | -1.0979 | |
| 48 | V | A | 1.4227 | |
| 49 | V | A | 1.9953 | |
| 50 | V | A | 1.2988 | |
| 51 | P | A | 0.4873 | |
| 52 | K | A | -0.6224 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.0907 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4723 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2921 | |
| 70 | K | A | -1.8103 | |
| 71 | F | A | -0.6671 | |
| 72 | A | A | -0.5786 | |
| 73 | L | A | -0.8517 | |
| 74 | P | A | -1.2494 | |
| 75 | Q | A | -2.4768 | |
| 76 | K | A | -3.0924 | |
| 77 | D | A | -2.9855 | |
| 78 | F | A | -1.6462 | |
| 79 | Y | A | -1.9164 | |
| 80 | D | A | -2.7507 | |
| 81 | P | A | -2.3433 | |
| 82 | E | A | -3.0645 | |
| 83 | K | A | -3.4388 | |
| 84 | E | A | -2.4988 | |
| 85 | R | A | -1.3088 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6331 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9699 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3249 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6789 | |
| 99 | G | A | -0.5393 | |
| 100 | P | A | -0.4232 | |
| 101 | L | A | 0.0094 | |
| 102 | G | A | -0.2067 | |
| 103 | K | A | -0.6020 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4293 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1452 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4155 | |
| 110 | L | A | 0.2416 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0971 | |
| 113 | K | A | -0.2261 | |
| 114 | F | A | -0.9414 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5628 | |
| 117 | T | A | -0.9314 | |
| 118 | E | A | -1.9709 | |
| 119 | N | A | -2.2846 | |
| 120 | P | A | -2.0798 | |
| 121 | T | A | -1.7151 | |
| 122 | E | A | -2.5638 | |
| 123 | P | A | -1.5765 | |
| 124 | Q | A | -1.8722 | |
| 125 | H | A | -1.6691 | |
| 126 | C | A | -1.0658 | |
| 127 | G | A | -1.4326 | |
| 128 | A | A | -1.3015 | |
| 129 | D | A | -2.1875 | |
| 130 | D | A | -1.7923 | |
| 131 | R | A | -1.1365 | |
| 132 | V | A | 0.2343 | |
| 133 | A | A | 0.4451 | |
| 134 | F | A | 0.2691 | |
| 135 | S | A | -0.0674 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6878 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.1980 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5626 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2477 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0820 | |
| 157 | D | A | 0.3193 | |
| 158 | I | A | 0.8475 | |
| 159 | A | A | 0.1185 | |
| 160 | E | A | -1.4791 | |
| 161 | P | A | -0.2554 | |
| 162 | C | A | 0.1668 | |
| 163 | P | A | -0.1811 | |
| 164 | G | A | -0.0861 | |
| 165 | L | A | 0.5789 | |
| 166 | P | A | -0.1175 | |
| 167 | P | A | -0.3430 | |
| 168 | G | A | -0.4200 | |
| 169 | A | A | -0.0225 | |
| 170 | C | A | 0.7508 | |
| 171 | P | A | 0.5439 | |
| 172 | P | A | 0.6890 | |
| 173 | I | A | 2.0332 | |
| 174 | Q | A | 0.8350 | |
| 175 | L | A | 1.4283 | |
| 176 | V | A | 0.8221 | |
| 177 | N | A | -0.3029 | |
| 178 | S | A | 0.0211 | |
| 179 | V | A | 0.3848 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3596 | |
| 182 | D | A | 0.0675 | |
| 183 | G | A | -0.1635 | |
| 184 | D | A | -0.6074 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4985 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0762 | |
| 190 | F | A | 0.0143 | |
| 191 | G | A | -0.1620 | |
| 192 | N | A | -0.3625 | |
| 193 | M | A | -0.2182 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4446 | |
| 197 | E | A | -2.6684 | |
| 198 | L | A | -1.2421 | |
| 199 | Q | A | -2.5556 | |
| 200 | Q | A | -3.3450 | |
| 201 | D | A | -3.6071 | |
| 202 | R | A | -3.3502 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2121 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3858 | |
| 211 | S | A | -1.9100 | |
| 212 | T | A | -1.5193 | |
| 213 | R | A | -2.2786 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2207 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2967 | |
| 220 | L | A | 0.5032 | |
| 221 | K | A | -1.3009 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9666 | |
| 224 | N | A | -1.6948 | |
| 225 | E | A | -1.3272 | |
| 226 | A | A | -0.6780 | |
| 227 | Y | A | -0.4498 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7070 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1413 | |
| 234 | F | A | 0.0251 | |
| 235 | G | A | -0.9232 | |
| 236 | R | A | -2.6507 | |
| 237 | R | A | -2.9019 | |
| 238 | E | A | -2.1033 | |
| 239 | Q | A | -0.1518 | |
| 240 | V | A | 1.5196 | |
| 241 | Y | A | 1.2209 | |
| 242 | A | A | 0.1600 | |
| 243 | R | A | -1.2804 | |
| 244 | H | A | -1.0381 | |
| 245 | F | A | 0.0357 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7231 | |
| 249 | C | A | -1.0487 | |
| 250 | G | A | -1.0209 | |
| 251 | P | A | -0.9573 | |
| 252 | E | A | -1.4366 | |
| 253 | G | A | -1.3284 | |
| 254 | H | A | -1.4855 | |
| 255 | P | A | -0.9335 | |
| 256 | L | A | 0.3010 | |
| 257 | P | A | 0.2371 | |
| 258 | S | A | 0.4013 | |
| 259 | A | A | 1.2475 | |
| 260 | L | A | 1.4849 | |
| 261 | P | A | 0.7817 | |
| 262 | P | A | 0.4902 | |
| 263 | S | A | 1.0779 | |
| 264 | P | A | 0.8702 | |
| 265 | L | A | 1.8552 | |
| 266 | Y | A | 1.9042 | |
| 267 | V | A | 2.2153 | |
| 268 | P | A | 1.3368 | |
| 269 | P | A | 0.6183 | |
| 270 | P | A | 0.1671 | |
| 271 | P | A | -0.2013 | |
| 272 | T | A | 0.0420 | |
| 273 | S | A | 0.1232 | |
| 274 | P | A | -0.1987 | |
| 275 | Y | A | 0.7407 | |
| 276 | W | A | 0.6989 | |
| 277 | K | A | -0.8037 | |
| 278 | L | A | 0.1989 | |
| 279 | P | A | -0.4743 | |
| 280 | P | A | -0.6569 | |
| 281 | T | A | -0.4547 | |
| 282 | D | A | -1.2017 | |
| 283 | Y | A | 0.7105 | |
| 284 | F | A | 0.6537 | |
| 285 | G | A | 0.2323 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9185 | |
| 291 | L | A | 1.6326 | |
| 292 | V | A | 0.6488 | |
| 293 | S | A | -0.1518 | |
| 294 | S | A | -0.9704 | |
| 295 | D | A | -1.8401 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1338 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6477 | |
| 301 | R | A | -1.8957 | |
| 302 | P | A | -0.9703 | |
| 303 | F | A | -0.1758 | |
| 304 | W | A | -0.5109 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0790 | |
| 307 | R | A | -2.9239 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7859 | |
| 310 | G | A | -1.4302 | |
| 311 | N | A | -1.4026 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9177 | |
| 319 | N | A | -0.8716 | |
| 320 | E | A | -1.0388 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3344 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1311 | |
| 333 | N | A | 0.4205 | |
| 334 | F | A | 1.4435 | |
| 335 | T | A | 0.7316 | |
| 336 | I | A | 0.3975 | |
| 337 | S | A | -1.0135 | |
| 338 | Q | A | -1.7395 | |
| 339 | Q | A | -1.3269 | |
| 340 | L | A | 0.6696 | |
| 341 | C | A | 0.5434 | |
| 342 | T | A | 0.0773 | |
| 343 | L | A | 0.1567 | |
| 344 | P | A | -0.6490 | |
| 345 | E | A | -1.8271 | |
| 346 | N | A | -1.0635 | |
| 347 | V | A | 0.9665 | |
| 348 | Y | A | 1.2391 | |
| 349 | D | A | 0.2839 | |
| 350 | P | A | -0.5190 | |
| 351 | S | A | -0.2848 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7734 | |
| 354 | K | A | -1.8122 | |
| 355 | N | A | -1.7674 | |
| 356 | Y | A | -0.1217 | |
| 357 | L | A | 0.5591 | |
| 358 | R | A | 0.8922 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4676 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0040 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9423 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6825 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3004 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3266 | |
| 376 | L | A | -1.7594 | |
| 377 | D | A | -2.0482 | |
| 378 | P | A | -1.0711 | |
| 379 | G | A | -1.0265 | |
| 380 | V | A | -0.9380 | |
| 381 | L | A | -0.5501 | |
| 382 | A | A | -0.6665 | |
| 383 | H | A | -0.8523 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4126 | |
| 386 | T | A | -0.5791 | |
| 387 | M | A | -0.3308 | |
| 388 | N | A | -0.8694 | |
| 389 | P | A | -1.2934 | |
| 390 | T | A | -1.5488 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5427 | |
| 393 | E | A | -3.1083 | |
| 394 | N | A | -2.7229 | |
| 395 | W | A | -1.5114 | |
| 396 | N | A | -1.2683 | |
| 397 | L | A | -0.1823 | |
| 398 | G | A | 0.5685 | |
| 399 | F | A | 2.4484 | |
| 400 | V | A | 2.0617 | |
| 401 | P | A | 0.0880 | |
| 402 | P | A | -1.8303 | |
| 403 | K | A | -3.4938 | |
| 404 | E | A | -3.8259 | |
| 405 | R | A | -4.0787 | |
| 406 | E | A | -3.7768 | |
| 407 | D | A | -2.7976 | |
| 408 | P | A | -1.6874 | |
| 409 | Y | A | -0.9709 | |
| 410 | K | A | -2.0317 | |
| 411 | G | A | -0.6729 | |
| 412 | L | A | 0.6246 | |
| 413 | I | A | 1.5427 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3723 | |
| 416 | E | A | -1.6145 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8254 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8860 | |
| 421 | E | A | -2.5012 | |
| 422 | R | A | -2.0841 | |
| 423 | F | A | -1.0254 | |
| 424 | S | A | -1.3181 | |
| 425 | Q | A | -1.8145 | |
| 426 | D | A | -2.8752 | |
| 427 | L | A | -1.9732 | |
| 428 | D | A | -2.7434 | |
| 429 | Q | A | -2.5876 | |
| 430 | F | A | -1.4243 | |
| 431 | A | A | -0.8958 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5863 | |
| 435 | K | A | -0.7319 | |
| 436 | F | A | 0.1555 | |
| 437 | L | A | 1.0320 | |
| 438 | Y | A | 0.8234 | |
| 439 | Q | A | -0.2714 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine