| Chain sequence(s) |
A: FEKGHFEF
C: FEKGHFEF B: FEKGHFEF E: FEKGHFEF D: FEKGHFEF G: FEKGHFEF F: FEKGHFEF I: FEKGHFEF H: FEKGHFEF K: FEKGHFEF J: FEKGHFEF L: FEKGHFEF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:47)
[INFO] Main: Simulation completed successfully. (00:04:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.4610 | |
| 2 | E | A | -2.2094 | |
| 3 | K | A | -2.8683 | |
| 4 | G | A | -2.3230 | |
| 5 | H | A | -2.2323 | |
| 6 | F | A | -0.9796 | |
| 7 | E | A | -0.8703 | |
| 8 | F | A | 1.9289 | |
| 1 | F | B | 1.3536 | |
| 2 | E | B | -1.3680 | |
| 3 | K | B | -2.8184 | |
| 4 | G | B | -2.9664 | |
| 5 | H | B | -2.7725 | |
| 6 | F | B | -1.7512 | |
| 7 | E | B | -1.4415 | |
| 8 | F | B | -0.2654 | |
| 1 | F | C | 0.2434 | |
| 2 | E | C | -2.4677 | |
| 3 | K | C | -3.2236 | |
| 4 | G | C | -2.0097 | |
| 5 | H | C | -1.8479 | |
| 6 | F | C | 0.0000 | |
| 7 | E | C | -1.2084 | |
| 8 | F | C | 0.0000 | |
| 1 | F | D | 0.3721 | |
| 2 | E | D | -2.1715 | |
| 3 | K | D | -2.9501 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | -2.3479 | |
| 6 | F | D | -0.9964 | |
| 7 | E | D | -0.3889 | |
| 8 | F | D | 1.6702 | |
| 1 | F | E | 0.5540 | |
| 2 | E | E | -1.6391 | |
| 3 | K | E | -2.5644 | |
| 4 | G | E | -2.3485 | |
| 5 | H | E | -2.6516 | |
| 6 | F | E | 0.0000 | |
| 7 | E | E | -2.5550 | |
| 8 | F | E | -1.2199 | |
| 1 | F | F | 0.5309 | |
| 2 | E | F | -1.9792 | |
| 3 | K | F | -3.0321 | |
| 4 | G | F | -2.5426 | |
| 5 | H | F | -2.6324 | |
| 6 | F | F | -1.4408 | |
| 7 | E | F | -1.4584 | |
| 8 | F | F | 0.7010 | |
| 1 | F | G | 0.4118 | |
| 2 | E | G | -1.7860 | |
| 3 | K | G | -2.6952 | |
| 4 | G | G | -2.3894 | |
| 5 | H | G | -3.0336 | |
| 6 | F | G | -1.8181 | |
| 7 | E | G | -2.7043 | |
| 8 | F | G | 0.0000 | |
| 1 | F | H | 0.1136 | |
| 2 | E | H | -2.4095 | |
| 3 | K | H | -2.8440 | |
| 4 | G | H | -2.4897 | |
| 5 | H | H | -2.2233 | |
| 6 | F | H | 0.0000 | |
| 7 | E | H | -1.1247 | |
| 8 | F | H | 0.0000 | |
| 1 | F | I | 0.6966 | |
| 2 | E | I | -2.0618 | |
| 3 | K | I | -2.6574 | |
| 4 | G | I | -2.4910 | |
| 5 | H | I | -2.2802 | |
| 6 | F | I | -1.0496 | |
| 7 | E | I | -1.7932 | |
| 8 | F | I | -0.7897 | |
| 1 | F | J | 0.6568 | |
| 2 | E | J | -1.7843 | |
| 3 | K | J | -2.7105 | |
| 4 | G | J | -2.5853 | |
| 5 | H | J | -2.2076 | |
| 6 | F | J | -1.5277 | |
| 7 | E | J | -2.0564 | |
| 8 | F | J | 0.0000 | |
| 1 | F | K | 0.3651 | |
| 2 | E | K | -2.0828 | |
| 3 | K | K | -2.9155 | |
| 4 | G | K | -2.2697 | |
| 5 | H | K | -2.1189 | |
| 6 | F | K | -1.4060 | |
| 7 | E | K | -1.6133 | |
| 8 | F | K | 0.4405 | |
| 1 | F | L | 0.4120 | |
| 2 | E | L | -2.0128 | |
| 3 | K | L | -2.7466 | |
| 4 | G | L | -2.5603 | |
| 5 | H | L | -2.5206 | |
| 6 | F | L | 0.0000 | |
| 7 | E | L | -1.7459 | |
| 8 | F | L | 0.5705 |