Project name: query_structure

Status: done

Started: 2026-03-17 01:29:38
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYWYQYSYYQYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:28)
Show buried residues

Minimal score value
-2.5708
Maximal score value
2.3255
Average score
-0.2534
Total score value
-23.816

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6633
2 S A 0.6189
3 S A 0.2128
4 V A -0.0567
5 P A 0.0000
6 T A -1.5177
7 K A -2.5708
8 L A 0.0000
9 E A -1.9032
10 V A 0.0820
11 V A 1.5122
12 A A 0.8728
13 A A 0.2881
14 T A -0.3829
15 P A -0.8024
16 T A -0.5282
17 S A -0.3228
18 L A 0.0000
19 L A 0.7013
20 I A 0.0000
21 S A -0.7246
22 W A 0.0000
23 D A -2.2478
24 A A -1.0721
25 S A -0.5441
26 S A -0.2557
27 S A -0.3513
28 S A 0.1382
29 V A 0.2575
30 S A 0.5070
31 Y A 0.0678
32 Y A 0.0000
33 R A -0.8414
34 I A 0.0000
35 T A -0.5926
36 Y A 0.0000
37 G A 0.0000
38 E A -1.2671
39 T A -1.2022
40 G A -1.2091
41 G A -1.3234
42 N A -1.5088
43 S A -0.7886
44 P A -0.2808
45 V A 0.4816
46 Q A -0.7499
47 E A -1.6332
48 F A -0.6952
49 T A -0.3937
50 V A 0.0000
51 P A -0.3840
52 G A -0.3057
53 S A -0.3813
54 S A -0.4269
55 S A -0.5735
56 T A -0.2390
57 A A 0.0000
58 T A 0.2798
59 I A 0.0000
60 S A -0.4765
61 G A -0.6819
62 L A 0.0000
63 S A -0.8098
64 P A -0.9823
65 G A -1.0718
66 V A -0.9241
67 D A -1.8013
68 Y A 0.0000
69 T A -0.7557
70 I A 0.0000
71 T A -0.2039
72 V A 0.0000
73 Y A -0.0320
74 A A 0.0000
75 Y A 0.0000
76 Y A 1.4178
77 W A 2.3255
78 Y A 2.0061
79 Q A 0.4799
80 Y A 1.6092
81 S A 1.4103
82 Y A 1.9200
83 Y A 1.3966
84 Q A -0.1526
85 Y A -0.0349
86 S A -0.1948
87 P A -0.1518
88 I A 0.1040
89 S A -0.5180
90 I A -0.7079
91 N A -1.7025
92 Y A -1.4059
93 R A -2.3082
94 T A -1.1761
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Laboratory of Theory of Biopolymers 2018