| Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
C: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA B: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA E: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA D: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA G: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA F: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA H: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:40)
[INFO] Main: Simulation completed successfully. (00:08:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.9248 | |
| 2 | A | A | -1.3079 | |
| 3 | E | A | -2.0268 | |
| 4 | F | A | -0.6551 | |
| 5 | R | A | -2.7221 | |
| 6 | H | A | -2.5603 | |
| 7 | D | A | -2.7433 | |
| 8 | S | A | -1.9150 | |
| 9 | G | A | 0.0000 | |
| 10 | Y | A | -0.7902 | |
| 11 | E | A | -1.4408 | |
| 12 | V | A | -0.0834 | |
| 13 | H | A | -1.3526 | |
| 14 | H | A | -1.9856 | |
| 15 | Q | A | -1.8763 | |
| 16 | K | A | -1.0206 | |
| 17 | L | A | -0.0927 | |
| 18 | V | A | 0.0000 | |
| 19 | F | A | 0.0000 | |
| 20 | F | A | -0.7431 | |
| 21 | A | A | -1.2630 | |
| 22 | E | A | -1.9500 | |
| 23 | D | A | -1.8383 | |
| 24 | V | A | -0.9960 | |
| 25 | G | A | -1.3707 | |
| 26 | S | A | -1.2925 | |
| 27 | N | A | -1.1886 | |
| 28 | K | A | -1.1436 | |
| 29 | G | A | -0.4873 | |
| 30 | A | A | -0.2937 | |
| 31 | I | A | 0.0000 | |
| 32 | I | A | 1.2434 | |
| 33 | G | A | 0.7399 | |
| 34 | L | A | 0.0000 | |
| 35 | M | A | 0.0000 | |
| 36 | V | A | 1.2317 | |
| 37 | G | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | V | A | 0.0000 | |
| 40 | V | A | 0.0000 | |
| 41 | I | A | 0.0000 | |
| 42 | A | A | -0.2920 | |
| 1 | D | B | -1.9371 | |
| 2 | A | B | -1.4106 | |
| 3 | E | B | -2.0057 | |
| 4 | F | B | -0.7991 | |
| 5 | R | B | -2.2963 | |
| 6 | H | B | -2.4530 | |
| 7 | D | B | -2.4624 | |
| 8 | S | B | -1.5240 | |
| 9 | G | B | 0.0000 | |
| 10 | Y | B | -0.6313 | |
| 11 | E | B | -0.8104 | |
| 12 | V | B | -0.2257 | |
| 13 | H | B | -1.0781 | |
| 14 | H | B | -1.5841 | |
| 15 | Q | B | -1.3520 | |
| 16 | K | B | 0.0000 | |
| 17 | L | B | 0.0000 | |
| 18 | V | B | 0.0000 | |
| 19 | F | B | 0.0000 | |
| 20 | F | B | -0.7170 | |
| 21 | A | B | -1.4825 | |
| 22 | E | B | -2.1684 | |
| 23 | D | B | -1.8144 | |
| 24 | V | B | -1.2274 | |
| 25 | G | B | -1.5912 | |
| 26 | S | B | -1.3235 | |
| 27 | N | B | -1.3817 | |
| 28 | K | B | -1.9495 | |
| 29 | G | B | -1.1271 | |
| 30 | A | B | 0.0000 | |
| 31 | I | B | 0.0000 | |
| 32 | I | B | 0.1849 | |
| 33 | G | B | 0.0000 | |
| 34 | L | B | 0.0000 | |
| 35 | M | B | 0.0000 | |
| 36 | V | B | 0.0000 | |
| 37 | G | B | 0.0000 | |
| 38 | G | B | 0.9545 | |
| 39 | V | B | 0.0000 | |
| 40 | V | B | 0.8367 | |
| 41 | I | B | 0.0000 | |
| 42 | A | B | -0.3334 | |
| 1 | D | C | -1.9206 | |
| 2 | A | C | -1.3776 | |
| 3 | E | C | -1.9448 | |
| 4 | F | C | -0.4313 | |
| 5 | R | C | -2.1565 | |
| 6 | H | C | -2.0727 | |
| 7 | D | C | -2.4678 | |
| 8 | S | C | -1.3764 | |
| 9 | G | C | 0.0000 | |
| 10 | Y | C | -0.3590 | |
| 11 | E | C | -0.3422 | |
| 12 | V | C | 0.3150 | |
| 13 | H | C | -1.5844 | |
| 14 | H | C | -1.9157 | |
| 15 | Q | C | -1.6109 | |
| 16 | K | C | -0.9186 | |
| 17 | L | C | 0.0000 | |
| 18 | V | C | 0.5509 | |
| 19 | F | C | 0.0000 | |
| 20 | F | C | 0.3332 | |
| 21 | A | C | 0.0000 | |
| 22 | E | C | -1.5357 | |
| 23 | D | C | -1.6075 | |
| 24 | V | C | 0.0000 | |
| 25 | G | C | -1.2331 | |
| 26 | S | C | -1.1746 | |
| 27 | N | C | 0.0000 | |
| 28 | K | C | -1.1932 | |
| 29 | G | C | -0.8244 | |
| 30 | A | C | 0.0000 | |
| 31 | I | C | 0.0000 | |
| 32 | I | C | 0.1037 | |
| 33 | G | C | 0.0000 | |
| 34 | L | C | 0.0000 | |
| 35 | M | C | 0.0000 | |
| 36 | V | C | 0.0000 | |
| 37 | G | C | 0.0000 | |
| 38 | G | C | 0.9329 | |
| 39 | V | C | 0.0000 | |
| 40 | V | C | 1.7769 | |
| 41 | I | C | 0.6339 | |
| 42 | A | C | -0.7026 | |
| 1 | D | D | -1.9216 | |
| 2 | A | D | -1.3838 | |
| 3 | E | D | -2.0609 | |
| 4 | F | D | -0.6636 | |
| 5 | R | D | -2.4610 | |
| 6 | H | D | -2.4176 | |
| 7 | D | D | -2.6543 | |
| 8 | S | D | -1.6439 | |
| 9 | G | D | 0.0000 | |
| 10 | Y | D | -0.4193 | |
| 11 | E | D | -0.2881 | |
| 12 | V | D | 0.9032 | |
| 13 | H | D | -0.9672 | |
| 14 | H | D | -1.7248 | |
| 15 | Q | D | -1.4299 | |
| 16 | K | D | -0.7607 | |
| 17 | L | D | 0.0000 | |
| 18 | V | D | 0.7276 | |
| 19 | F | D | 0.0000 | |
| 20 | F | D | 0.0467 | |
| 21 | A | D | -0.6390 | |
| 22 | E | D | -2.0576 | |
| 23 | D | D | -1.7739 | |
| 24 | V | D | -1.1676 | |
| 25 | G | D | -1.5159 | |
| 26 | S | D | -1.3806 | |
| 27 | N | D | -1.1163 | |
| 28 | K | D | -1.3796 | |
| 29 | G | D | -0.8098 | |
| 30 | A | D | 0.0000 | |
| 31 | I | D | 0.0000 | |
| 32 | I | D | 0.3127 | |
| 33 | G | D | 0.0000 | |
| 34 | L | D | 0.0000 | |
| 35 | M | D | 0.0000 | |
| 36 | V | D | 0.6564 | |
| 37 | G | D | 0.0000 | |
| 38 | G | D | 0.8317 | |
| 39 | V | D | 1.4329 | |
| 40 | V | D | 1.9533 | |
| 41 | I | D | 0.0000 | |
| 42 | A | D | -0.4034 | |
| 1 | D | E | -1.9229 | |
| 2 | A | E | -1.4106 | |
| 3 | E | E | -2.1930 | |
| 4 | F | E | -0.7679 | |
| 5 | R | E | -2.4204 | |
| 6 | H | E | -2.4635 | |
| 7 | D | E | -2.7775 | |
| 8 | S | E | -1.7500 | |
| 9 | G | E | 0.0000 | |
| 10 | Y | E | 0.0000 | |
| 11 | E | E | -0.4389 | |
| 12 | V | E | 0.2858 | |
| 13 | H | E | -1.4303 | |
| 14 | H | E | -1.9081 | |
| 15 | Q | E | -1.7220 | |
| 16 | K | E | -1.0698 | |
| 17 | L | E | 0.6438 | |
| 18 | V | E | 1.0165 | |
| 19 | F | E | 0.0000 | |
| 20 | F | E | 0.7394 | |
| 21 | A | E | -0.1319 | |
| 22 | E | E | -2.0039 | |
| 23 | D | E | -1.6639 | |
| 24 | V | E | 0.0000 | |
| 25 | G | E | -1.3647 | |
| 26 | S | E | -1.3291 | |
| 27 | N | E | -1.1472 | |
| 28 | K | E | -1.1154 | |
| 29 | G | E | -0.7246 | |
| 30 | A | E | 0.0000 | |
| 31 | I | E | 0.0000 | |
| 32 | I | E | 0.3022 | |
| 33 | G | E | 0.0000 | |
| 34 | L | E | 0.0000 | |
| 35 | M | E | 0.0000 | |
| 36 | V | E | 0.0000 | |
| 37 | G | E | 0.0000 | |
| 38 | G | E | 0.8915 | |
| 39 | V | E | 0.0000 | |
| 40 | V | E | 1.9760 | |
| 41 | I | E | 0.0000 | |
| 42 | A | E | -0.8955 | |
| 1 | D | F | -1.9323 | |
| 2 | A | F | -1.4123 | |
| 3 | E | F | -1.9853 | |
| 4 | F | F | -0.5035 | |
| 5 | R | F | -2.2609 | |
| 6 | H | F | -2.3151 | |
| 7 | D | F | -2.7244 | |
| 8 | S | F | -1.4213 | |
| 9 | G | F | 0.0000 | |
| 10 | Y | F | -0.3347 | |
| 11 | E | F | -0.1190 | |
| 12 | V | F | 0.3620 | |
| 13 | H | F | -1.4774 | |
| 14 | H | F | -1.9698 | |
| 15 | Q | F | -1.8196 | |
| 16 | K | F | -1.2963 | |
| 17 | L | F | 0.5387 | |
| 18 | V | F | 0.8738 | |
| 19 | F | F | 0.0000 | |
| 20 | F | F | -0.1230 | |
| 21 | A | F | -0.5011 | |
| 22 | E | F | -2.0606 | |
| 23 | D | F | -1.7431 | |
| 24 | V | F | -0.9859 | |
| 25 | G | F | -1.2771 | |
| 26 | S | F | -1.3707 | |
| 27 | N | F | -1.1526 | |
| 28 | K | F | -1.0892 | |
| 29 | G | F | -0.6628 | |
| 30 | A | F | -0.3421 | |
| 31 | I | F | 0.0000 | |
| 32 | I | F | 0.3769 | |
| 33 | G | F | 0.0000 | |
| 34 | L | F | 0.0000 | |
| 35 | M | F | 0.0000 | |
| 36 | V | F | 0.0000 | |
| 37 | G | F | 0.0000 | |
| 38 | G | F | 0.8999 | |
| 39 | V | F | 0.0000 | |
| 40 | V | F | 1.8310 | |
| 41 | I | F | 0.5642 | |
| 42 | A | F | -1.1804 | |
| 1 | D | G | -1.9247 | |
| 2 | A | G | -1.3964 | |
| 3 | E | G | -2.0674 | |
| 4 | F | G | -0.7066 | |
| 5 | R | G | -2.3394 | |
| 6 | H | G | -2.3890 | |
| 7 | D | G | -2.7603 | |
| 8 | S | G | -1.6085 | |
| 9 | G | G | 0.0000 | |
| 10 | Y | G | -0.3928 | |
| 11 | E | G | -0.3401 | |
| 12 | V | G | 0.5392 | |
| 13 | H | G | -1.1797 | |
| 14 | H | G | -1.8452 | |
| 15 | Q | G | -1.7534 | |
| 16 | K | G | -1.1076 | |
| 17 | L | G | 0.0000 | |
| 18 | V | G | 0.5803 | |
| 19 | F | G | 0.0000 | |
| 20 | F | G | 0.2498 | |
| 21 | A | G | -0.6349 | |
| 22 | E | G | -2.0033 | |
| 23 | D | G | -1.7070 | |
| 24 | V | G | -1.0192 | |
| 25 | G | G | -1.3820 | |
| 26 | S | G | -1.4735 | |
| 27 | N | G | -1.2288 | |
| 28 | K | G | -1.2341 | |
| 29 | G | G | -1.0519 | |
| 30 | A | G | -0.6461 | |
| 31 | I | G | 0.0000 | |
| 32 | I | G | 0.2484 | |
| 33 | G | G | 0.0000 | |
| 34 | L | G | 0.0000 | |
| 35 | M | G | 0.0000 | |
| 36 | V | G | 0.6334 | |
| 37 | G | G | 0.0000 | |
| 38 | G | G | 0.7358 | |
| 39 | V | G | 0.0000 | |
| 40 | V | G | 1.1559 | |
| 41 | I | G | 0.6437 | |
| 42 | A | G | -0.3119 | |
| 1 | D | H | -1.9259 | |
| 2 | A | H | -1.3201 | |
| 3 | E | H | -2.0358 | |
| 4 | F | H | -0.6723 | |
| 5 | R | H | -2.5836 | |
| 6 | H | H | -2.4499 | |
| 7 | D | H | -2.5937 | |
| 8 | S | H | -1.7618 | |
| 9 | G | H | 0.0000 | |
| 10 | Y | H | -0.6145 | |
| 11 | E | H | -1.1318 | |
| 12 | V | H | -0.4651 | |
| 13 | H | H | -1.7878 | |
| 14 | H | H | -2.1976 | |
| 15 | Q | H | -2.3461 | |
| 16 | K | H | -1.9823 | |
| 17 | L | H | -0.4361 | |
| 18 | V | H | -0.1689 | |
| 19 | F | H | 0.0000 | |
| 20 | F | H | 0.0132 | |
| 21 | A | H | -0.6223 | |
| 22 | E | H | -1.8639 | |
| 23 | D | H | -1.8032 | |
| 24 | V | H | -1.3190 | |
| 25 | G | H | -1.7192 | |
| 26 | S | H | -1.4928 | |
| 27 | N | H | -1.4702 | |
| 28 | K | H | -2.1550 | |
| 29 | G | H | -1.5032 | |
| 30 | A | H | -0.8533 | |
| 31 | I | H | 0.0000 | |
| 32 | I | H | -0.1148 | |
| 33 | G | H | -0.2051 | |
| 34 | L | H | 0.0000 | |
| 35 | M | H | 0.0000 | |
| 36 | V | H | 0.0000 | |
| 37 | G | H | 0.0000 | |
| 38 | G | H | 0.7126 | |
| 39 | V | H | 0.0000 | |
| 40 | V | H | 0.3878 | |
| 41 | I | H | 0.0000 | |
| 42 | A | H | -1.0022 |