Project name: A?42_8

Status: done

Started: 2026-06-20 07:00:29
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Chain sequence(s) A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
C: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
B: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
E: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
D: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
G: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
F: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
H: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB
Selected Chain(s) A,C,B,E,D,G,F,H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:08:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:08:43)
Show buried residues

Minimal score value
-2.7775
Maximal score value
1.976
Average score
-0.7284
Total score value
-244.7412

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.9248
2 A A -1.3079
3 E A -2.0268
4 F A -0.6551
5 R A -2.7221
6 H A -2.5603
7 D A -2.7433
8 S A -1.9150
9 G A 0.0000
10 Y A -0.7902
11 E A -1.4408
12 V A -0.0834
13 H A -1.3526
14 H A -1.9856
15 Q A -1.8763
16 K A -1.0206
17 L A -0.0927
18 V A 0.0000
19 F A 0.0000
20 F A -0.7431
21 A A -1.2630
22 E A -1.9500
23 D A -1.8383
24 V A -0.9960
25 G A -1.3707
26 S A -1.2925
27 N A -1.1886
28 K A -1.1436
29 G A -0.4873
30 A A -0.2937
31 I A 0.0000
32 I A 1.2434
33 G A 0.7399
34 L A 0.0000
35 M A 0.0000
36 V A 1.2317
37 G A 0.0000
38 G A 0.0000
39 V A 0.0000
40 V A 0.0000
41 I A 0.0000
42 A A -0.2920
1 D B -1.9371
2 A B -1.4106
3 E B -2.0057
4 F B -0.7991
5 R B -2.2963
6 H B -2.4530
7 D B -2.4624
8 S B -1.5240
9 G B 0.0000
10 Y B -0.6313
11 E B -0.8104
12 V B -0.2257
13 H B -1.0781
14 H B -1.5841
15 Q B -1.3520
16 K B 0.0000
17 L B 0.0000
18 V B 0.0000
19 F B 0.0000
20 F B -0.7170
21 A B -1.4825
22 E B -2.1684
23 D B -1.8144
24 V B -1.2274
25 G B -1.5912
26 S B -1.3235
27 N B -1.3817
28 K B -1.9495
29 G B -1.1271
30 A B 0.0000
31 I B 0.0000
32 I B 0.1849
33 G B 0.0000
34 L B 0.0000
35 M B 0.0000
36 V B 0.0000
37 G B 0.0000
38 G B 0.9545
39 V B 0.0000
40 V B 0.8367
41 I B 0.0000
42 A B -0.3334
1 D C -1.9206
2 A C -1.3776
3 E C -1.9448
4 F C -0.4313
5 R C -2.1565
6 H C -2.0727
7 D C -2.4678
8 S C -1.3764
9 G C 0.0000
10 Y C -0.3590
11 E C -0.3422
12 V C 0.3150
13 H C -1.5844
14 H C -1.9157
15 Q C -1.6109
16 K C -0.9186
17 L C 0.0000
18 V C 0.5509
19 F C 0.0000
20 F C 0.3332
21 A C 0.0000
22 E C -1.5357
23 D C -1.6075
24 V C 0.0000
25 G C -1.2331
26 S C -1.1746
27 N C 0.0000
28 K C -1.1932
29 G C -0.8244
30 A C 0.0000
31 I C 0.0000
32 I C 0.1037
33 G C 0.0000
34 L C 0.0000
35 M C 0.0000
36 V C 0.0000
37 G C 0.0000
38 G C 0.9329
39 V C 0.0000
40 V C 1.7769
41 I C 0.6339
42 A C -0.7026
1 D D -1.9216
2 A D -1.3838
3 E D -2.0609
4 F D -0.6636
5 R D -2.4610
6 H D -2.4176
7 D D -2.6543
8 S D -1.6439
9 G D 0.0000
10 Y D -0.4193
11 E D -0.2881
12 V D 0.9032
13 H D -0.9672
14 H D -1.7248
15 Q D -1.4299
16 K D -0.7607
17 L D 0.0000
18 V D 0.7276
19 F D 0.0000
20 F D 0.0467
21 A D -0.6390
22 E D -2.0576
23 D D -1.7739
24 V D -1.1676
25 G D -1.5159
26 S D -1.3806
27 N D -1.1163
28 K D -1.3796
29 G D -0.8098
30 A D 0.0000
31 I D 0.0000
32 I D 0.3127
33 G D 0.0000
34 L D 0.0000
35 M D 0.0000
36 V D 0.6564
37 G D 0.0000
38 G D 0.8317
39 V D 1.4329
40 V D 1.9533
41 I D 0.0000
42 A D -0.4034
1 D E -1.9229
2 A E -1.4106
3 E E -2.1930
4 F E -0.7679
5 R E -2.4204
6 H E -2.4635
7 D E -2.7775
8 S E -1.7500
9 G E 0.0000
10 Y E 0.0000
11 E E -0.4389
12 V E 0.2858
13 H E -1.4303
14 H E -1.9081
15 Q E -1.7220
16 K E -1.0698
17 L E 0.6438
18 V E 1.0165
19 F E 0.0000
20 F E 0.7394
21 A E -0.1319
22 E E -2.0039
23 D E -1.6639
24 V E 0.0000
25 G E -1.3647
26 S E -1.3291
27 N E -1.1472
28 K E -1.1154
29 G E -0.7246
30 A E 0.0000
31 I E 0.0000
32 I E 0.3022
33 G E 0.0000
34 L E 0.0000
35 M E 0.0000
36 V E 0.0000
37 G E 0.0000
38 G E 0.8915
39 V E 0.0000
40 V E 1.9760
41 I E 0.0000
42 A E -0.8955
1 D F -1.9323
2 A F -1.4123
3 E F -1.9853
4 F F -0.5035
5 R F -2.2609
6 H F -2.3151
7 D F -2.7244
8 S F -1.4213
9 G F 0.0000
10 Y F -0.3347
11 E F -0.1190
12 V F 0.3620
13 H F -1.4774
14 H F -1.9698
15 Q F -1.8196
16 K F -1.2963
17 L F 0.5387
18 V F 0.8738
19 F F 0.0000
20 F F -0.1230
21 A F -0.5011
22 E F -2.0606
23 D F -1.7431
24 V F -0.9859
25 G F -1.2771
26 S F -1.3707
27 N F -1.1526
28 K F -1.0892
29 G F -0.6628
30 A F -0.3421
31 I F 0.0000
32 I F 0.3769
33 G F 0.0000
34 L F 0.0000
35 M F 0.0000
36 V F 0.0000
37 G F 0.0000
38 G F 0.8999
39 V F 0.0000
40 V F 1.8310
41 I F 0.5642
42 A F -1.1804
1 D G -1.9247
2 A G -1.3964
3 E G -2.0674
4 F G -0.7066
5 R G -2.3394
6 H G -2.3890
7 D G -2.7603
8 S G -1.6085
9 G G 0.0000
10 Y G -0.3928
11 E G -0.3401
12 V G 0.5392
13 H G -1.1797
14 H G -1.8452
15 Q G -1.7534
16 K G -1.1076
17 L G 0.0000
18 V G 0.5803
19 F G 0.0000
20 F G 0.2498
21 A G -0.6349
22 E G -2.0033
23 D G -1.7070
24 V G -1.0192
25 G G -1.3820
26 S G -1.4735
27 N G -1.2288
28 K G -1.2341
29 G G -1.0519
30 A G -0.6461
31 I G 0.0000
32 I G 0.2484
33 G G 0.0000
34 L G 0.0000
35 M G 0.0000
36 V G 0.6334
37 G G 0.0000
38 G G 0.7358
39 V G 0.0000
40 V G 1.1559
41 I G 0.6437
42 A G -0.3119
1 D H -1.9259
2 A H -1.3201
3 E H -2.0358
4 F H -0.6723
5 R H -2.5836
6 H H -2.4499
7 D H -2.5937
8 S H -1.7618
9 G H 0.0000
10 Y H -0.6145
11 E H -1.1318
12 V H -0.4651
13 H H -1.7878
14 H H -2.1976
15 Q H -2.3461
16 K H -1.9823
17 L H -0.4361
18 V H -0.1689
19 F H 0.0000
20 F H 0.0132
21 A H -0.6223
22 E H -1.8639
23 D H -1.8032
24 V H -1.3190
25 G H -1.7192
26 S H -1.4928
27 N H -1.4702
28 K H -2.1550
29 G H -1.5032
30 A H -0.8533
31 I H 0.0000
32 I H -0.1148
33 G H -0.2051
34 L H 0.0000
35 M H 0.0000
36 V H 0.0000
37 G H 0.0000
38 G H 0.7126
39 V H 0.0000
40 V H 0.3878
41 I H 0.0000
42 A H -1.0022
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Laboratory of Theory of Biopolymers 2018